| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2012-09-06 15:16:51 UTC |
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| Update Date | 2022-03-07 02:51:58 UTC |
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| HMDB ID | HMDB0015369 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | Chlorprothixene |
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| Description | Chlorprothixene is only found in individuals that have used or taken this drug. It is a typical antipsychotic drug of the thioxanthene (tricyclic) class. Chlorprothixene exerts strong blocking effects by blocking the 5-HT2 D1, D2, D3, histamine H1, muscarinic and alpha1 adrenergic receptors. Chlorprothixene blocks postsynaptic mesolimbic dopaminergic D1 and D2 receptors in the brain; depresses the release of hypothalamic and hypophyseal hormones and is believed to depress the reticular activating system thus affecting basal metabolism, body temperature, wakefulness, vasomotor tone, and emesis. |
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| Structure | [H]C(CCN(C)C)=C1C2=CC(Cl)=CC=C2SC2=C1C=CC=C2 InChI=1S/C18H18ClNS/c1-20(2)11-5-7-14-15-6-3-4-8-17(15)21-18-10-9-13(19)12-16(14)18/h3-4,6-10,12H,5,11H2,1-2H3 |
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| Synonyms | | Value | Source |
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| Alpha-Chlorprothixene | ChEBI | | Chlorprothixen | ChEBI | | Chlorprothixenum | ChEBI | | Chlorprothixine | ChEBI | | Chlorprotixen | ChEBI | | Chlorprotixene | ChEBI | | Chlorprotixine | ChEBI | | Chlothixen | ChEBI | | Clorprotixeno | ChEBI | | a-Chlorprothixene | Generator | | Α-chlorprothixene | Generator | | Chloroprothixene | HMDB | | cis-Chlorprothixene | HMDB |
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| Chemical Formula | C18H18ClNS |
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| Average Molecular Weight | 315.86 |
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| Monoisotopic Molecular Weight | 315.084847978 |
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| IUPAC Name | [3-(2-chloro-9H-thioxanthen-9-ylidene)propyl]dimethylamine |
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| Traditional Name | chlorprothixene |
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| CAS Registry Number | 113-59-7 |
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| SMILES | [H]C(CCN(C)C)=C1C2=CC(Cl)=CC=C2SC2=C1C=CC=C2 |
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| InChI Identifier | InChI=1S/C18H18ClNS/c1-20(2)11-5-7-14-15-6-3-4-8-17(15)21-18-10-9-13(19)12-16(14)18/h3-4,6-10,12H,5,11H2,1-2H3 |
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| InChI Key | WSPOMRSOLSGNFJ-UHFFFAOYSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as thioxanthenes. These are organic polycyclic compounds containing a thioxanthene moiety, which is an aromatic tricycle derived from xanthene by replacing the oxygen atom with a sulfur atom. |
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| Kingdom | Organic compounds |
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| Super Class | Organoheterocyclic compounds |
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| Class | Benzothiopyrans |
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| Sub Class | 1-benzothiopyrans |
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| Direct Parent | Thioxanthenes |
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| Alternative Parents | |
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| Substituents | - Thioxanthene
- Diarylthioether
- Aryl thioether
- Aryl chloride
- Aryl halide
- Benzenoid
- Tertiary amine
- Tertiary aliphatic amine
- Thioether
- Hydrocarbon derivative
- Organonitrogen compound
- Organochloride
- Organohalogen compound
- Organopnictogen compound
- Organic nitrogen compound
- Amine
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | 97.5 °C | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | 0.00037 g/L | Not Available | | LogP | 5.2 | Not Available |
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| Experimental Chromatographic Properties | Experimental Collision Cross Sections| Adduct Type | Data Source | CCS Value (Å2) | Reference |
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| [M+H]+ | CBM | 170.1 | 30932474 |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 7.4 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 11.5585 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 1.88 minutes | 32390414 | | AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid | 57.7 seconds | 40023050 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 1445.4 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 289.1 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 164.8 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 194.5 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 126.7 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 411.3 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 482.3 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 585.6 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 1064.0 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 329.9 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 1167.1 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 265.1 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 377.8 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 366.5 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 321.7 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 20.6 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatized |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted GC-MS | Predicted GC-MS Spectrum - Chlorprothixene GC-MS (Non-derivatized) - 70eV, Positive | splash10-0a4i-9141000000-a255fe02bf54679c244c | 2017-08-28 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Chlorprothixene GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Chlorprothixene GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 10V, Positive-QTOF | splash10-014i-0039000000-168becd0e5466111ccfe | 2017-07-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 20V, Positive-QTOF | splash10-00xr-5195000000-6e5732b797c5a9486658 | 2017-07-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 40V, Positive-QTOF | splash10-0cfr-7960000000-2c538753d3054b90ff9a | 2017-07-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 10V, Negative-QTOF | splash10-03di-0019000000-a1743d1d17667134489f | 2017-07-26 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 20V, Negative-QTOF | splash10-03di-1029000000-787c812f5a4ba12e8d3c | 2017-07-26 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 40V, Negative-QTOF | splash10-054o-5090000000-6b5145b6878c2a8e60d4 | 2017-07-26 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 10V, Positive-QTOF | splash10-014i-0029000000-a00d12aceae6b3285ae6 | 2021-10-11 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 20V, Positive-QTOF | splash10-014i-0069000000-d4fb2701e28b340b322c | 2021-10-11 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 40V, Positive-QTOF | splash10-0a4l-1190000000-7635146eedb0ace426ab | 2021-10-11 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 10V, Negative-QTOF | splash10-03di-0009000000-e39233c143c85e784a98 | 2021-10-11 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 20V, Negative-QTOF | splash10-03di-1049000000-de44800dc9166cf94dbc | 2021-10-11 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlorprothixene 40V, Negative-QTOF | splash10-0ab9-2090000000-86da4a0bc425759d0598 | 2021-10-11 | Wishart Lab | View Spectrum |
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