Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2012-09-11 17:36:26 UTC |
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Update Date | 2023-02-21 17:19:34 UTC |
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HMDB ID | HMDB0030376 |
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Secondary Accession Numbers | |
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Metabolite Identification |
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Common Name | (S)-Isowillardiine |
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Description | (S)-Isowillardiine belongs to the class of organic compounds known as alpha amino acids. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon) (S)-Isowillardiine has been detected, but not quantified in, common peas (Pisum sativum) and pulses. This could make (S)-isowillardiine a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on (S)-Isowillardiine. |
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Structure | NC(CN1C(O)=NC=CC1=O)C(O)=O InChI=1S/C7H9N3O4/c8-4(6(12)13)3-10-5(11)1-2-9-7(10)14/h1-2,4H,3,8H2,(H,9,14)(H,12,13) |
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Synonyms | Value | Source |
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beta-(2,4-Dihydroxypyrimidin-3-yl)alanine | HMDB | Isowillardiine | HMDB | 2-Amino-3-(2-hydroxy-6-oxo-1,6-dihydropyrimidin-1-yl)propanoate | Generator |
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Chemical Formula | C7H9N3O4 |
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Average Molecular Weight | 199.1641 |
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Monoisotopic Molecular Weight | 199.059305791 |
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IUPAC Name | 2-amino-3-(2-hydroxy-6-oxo-1,6-dihydropyrimidin-1-yl)propanoic acid |
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Traditional Name | 2-amino-3-(2-hydroxy-6-oxopyrimidin-1-yl)propanoic acid |
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CAS Registry Number | 21381-33-9 |
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SMILES | NC(CN1C(O)=NC=CC1=O)C(O)=O |
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InChI Identifier | InChI=1S/C7H9N3O4/c8-4(6(12)13)3-10-5(11)1-2-9-7(10)14/h1-2,4H,3,8H2,(H,9,14)(H,12,13) |
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InChI Key | AZSWUZQIIMMKOZ-UHFFFAOYSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as alpha amino acids. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon). |
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Kingdom | Organic compounds |
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Super Class | Organic acids and derivatives |
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Class | Carboxylic acids and derivatives |
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Sub Class | Amino acids, peptides, and analogues |
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Direct Parent | Alpha amino acids |
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Alternative Parents | |
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Substituents | - Alpha-amino acid
- Pyrimidone
- Hydropyrimidine
- Pyrimidine
- Vinylogous amide
- Heteroaromatic compound
- Amino acid
- Urea
- Lactam
- Azacycle
- Organoheterocyclic compound
- Carboxylic acid
- Monocarboxylic acid or derivatives
- Amine
- Primary amine
- Organooxygen compound
- Organonitrogen compound
- Organopnictogen compound
- Primary aliphatic amine
- Organic oxide
- Organic oxygen compound
- Organic nitrogen compound
- Carbonyl group
- Hydrocarbon derivative
- Aromatic heteromonocyclic compound
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Molecular Framework | Aromatic heteromonocyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times UnderivatizedChromatographic Method | Retention Time | Reference |
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Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 1.03 minutes | 32390414 | Predicted by Siyang on May 30, 2022 | 10.1683 minutes | 33406817 | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 8.5 minutes | 32390414 | AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid | 405.6 seconds | 40023050 | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 401.9 seconds | 40023050 | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 336.8 seconds | 40023050 | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 30.1 seconds | 40023050 | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 201.0 seconds | 40023050 | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 78.6 seconds | 40023050 | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 338.2 seconds | 40023050 | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 228.7 seconds | 40023050 | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 805.4 seconds | 40023050 | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 628.1 seconds | 40023050 | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 45.5 seconds | 40023050 | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 748.5 seconds | 40023050 | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 209.7 seconds | 40023050 | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 362.8 seconds | 40023050 | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 808.5 seconds | 40023050 | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 518.3 seconds | 40023050 | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 384.3 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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(S)-Isowillardiine,1TMS,isomer #1 | C[Si](C)(C)OC1=NC=CC(=O)N1CC(N)C(=O)O | 2000.7 | Semi standard non polar | 33892256 | (S)-Isowillardiine,1TMS,isomer #2 | C[Si](C)(C)OC(=O)C(N)CN1C(O)=NC=CC1=O | 2077.3 | Semi standard non polar | 33892256 | (S)-Isowillardiine,1TMS,isomer #3 | C[Si](C)(C)NC(CN1C(O)=NC=CC1=O)C(=O)O | 2124.4 | Semi standard non polar | 33892256 | (S)-Isowillardiine,2TMS,isomer #1 | C[Si](C)(C)OC(=O)C(N)CN1C(O[Si](C)(C)C)=NC=CC1=O | 1996.8 | Semi standard non polar | 33892256 | (S)-Isowillardiine,2TMS,isomer #2 | C[Si](C)(C)NC(CN1C(O[Si](C)(C)C)=NC=CC1=O)C(=O)O | 2059.4 | Semi standard non polar | 33892256 | (S)-Isowillardiine,2TMS,isomer #3 | C[Si](C)(C)NC(CN1C(O)=NC=CC1=O)C(=O)O[Si](C)(C)C | 2127.3 | Semi standard non polar | 33892256 | (S)-Isowillardiine,2TMS,isomer #4 | C[Si](C)(C)N(C(CN1C(O)=NC=CC1=O)C(=O)O)[Si](C)(C)C | 2264.6 | Semi standard non polar | 33892256 | (S)-Isowillardiine,3TMS,isomer #1 | C[Si](C)(C)NC(CN1C(O[Si](C)(C)C)=NC=CC1=O)C(=O)O[Si](C)(C)C | 2032.1 | Semi standard non polar | 33892256 | (S)-Isowillardiine,3TMS,isomer #1 | C[Si](C)(C)NC(CN1C(O[Si](C)(C)C)=NC=CC1=O)C(=O)O[Si](C)(C)C | 2136.4 | Standard non polar | 33892256 | (S)-Isowillardiine,3TMS,isomer #2 | C[Si](C)(C)OC1=NC=CC(=O)N1CC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C | 2222.2 | Semi standard non polar | 33892256 | (S)-Isowillardiine,3TMS,isomer #2 | C[Si](C)(C)OC1=NC=CC(=O)N1CC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C | 2247.9 | Standard non polar | 33892256 | (S)-Isowillardiine,3TMS,isomer #3 | C[Si](C)(C)OC(=O)C(CN1C(O)=NC=CC1=O)N([Si](C)(C)C)[Si](C)(C)C | 2260.6 | Semi standard non polar | 33892256 | (S)-Isowillardiine,3TMS,isomer #3 | C[Si](C)(C)OC(=O)C(CN1C(O)=NC=CC1=O)N([Si](C)(C)C)[Si](C)(C)C | 2246.0 | Standard non polar | 33892256 | (S)-Isowillardiine,4TMS,isomer #1 | C[Si](C)(C)OC(=O)C(CN1C(O[Si](C)(C)C)=NC=CC1=O)N([Si](C)(C)C)[Si](C)(C)C | 2242.6 | Semi standard non polar | 33892256 | (S)-Isowillardiine,4TMS,isomer #1 | C[Si](C)(C)OC(=O)C(CN1C(O[Si](C)(C)C)=NC=CC1=O)N([Si](C)(C)C)[Si](C)(C)C | 2272.0 | Standard non polar | 33892256 | (S)-Isowillardiine,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC1=NC=CC(=O)N1CC(N)C(=O)O | 2278.4 | Semi standard non polar | 33892256 | (S)-Isowillardiine,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)OC(=O)C(N)CN1C(O)=NC=CC1=O | 2358.2 | Semi standard non polar | 33892256 | (S)-Isowillardiine,1TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)NC(CN1C(O)=NC=CC1=O)C(=O)O | 2420.3 | Semi standard non polar | 33892256 | (S)-Isowillardiine,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC(=O)C(N)CN1C(O[Si](C)(C)C(C)(C)C)=NC=CC1=O | 2498.1 | Semi standard non polar | 33892256 | (S)-Isowillardiine,2TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)NC(CN1C(O[Si](C)(C)C(C)(C)C)=NC=CC1=O)C(=O)O | 2534.6 | Semi standard non polar | 33892256 | (S)-Isowillardiine,2TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)NC(CN1C(O)=NC=CC1=O)C(=O)O[Si](C)(C)C(C)(C)C | 2612.9 | Semi standard non polar | 33892256 | (S)-Isowillardiine,2TBDMS,isomer #4 | CC(C)(C)[Si](C)(C)N(C(CN1C(O)=NC=CC1=O)C(=O)O)[Si](C)(C)C(C)(C)C | 2743.4 | Semi standard non polar | 33892256 | (S)-Isowillardiine,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)NC(CN1C(O[Si](C)(C)C(C)(C)C)=NC=CC1=O)C(=O)O[Si](C)(C)C(C)(C)C | 2698.6 | Semi standard non polar | 33892256 | (S)-Isowillardiine,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)NC(CN1C(O[Si](C)(C)C(C)(C)C)=NC=CC1=O)C(=O)O[Si](C)(C)C(C)(C)C | 2762.4 | Standard non polar | 33892256 | (S)-Isowillardiine,3TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)OC1=NC=CC(=O)N1CC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2921.5 | Semi standard non polar | 33892256 | (S)-Isowillardiine,3TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)OC1=NC=CC(=O)N1CC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2839.7 | Standard non polar | 33892256 | (S)-Isowillardiine,3TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)OC(=O)C(CN1C(O)=NC=CC1=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2929.4 | Semi standard non polar | 33892256 | (S)-Isowillardiine,3TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)OC(=O)C(CN1C(O)=NC=CC1=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2835.7 | Standard non polar | 33892256 | (S)-Isowillardiine,4TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC(=O)C(CN1C(O[Si](C)(C)C(C)(C)C)=NC=CC1=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3108.2 | Semi standard non polar | 33892256 | (S)-Isowillardiine,4TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC(=O)C(CN1C(O[Si](C)(C)C(C)(C)C)=NC=CC1=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3031.4 | Standard non polar | 33892256 |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted GC-MS | Predicted GC-MS Spectrum - (S)-Isowillardiine GC-MS (Non-derivatized) - 70eV, Positive | splash10-004i-5900000000-fb24e16ca618423fdf08 | 2017-09-01 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (S)-Isowillardiine GC-MS (2 TMS) - 70eV, Positive | splash10-004i-3390000000-bb7f1a443c9a8ae102ba | 2017-10-06 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (S)-Isowillardiine GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 10V, Positive-QTOF | splash10-0udi-2950000000-9963f0c8b3bf77b109f2 | 2016-06-03 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 20V, Positive-QTOF | splash10-0udi-3900000000-eebc3deba88d4dc4e1a4 | 2016-06-03 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 40V, Positive-QTOF | splash10-0006-9000000000-898c4157b873d4656cbd | 2016-06-03 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 10V, Negative-QTOF | splash10-0002-0900000000-c5e49e44a1b2c83240ec | 2016-08-03 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 20V, Negative-QTOF | splash10-002g-5900000000-e72e0acd1dde59374fc6 | 2016-08-03 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 40V, Negative-QTOF | splash10-0006-9000000000-13f464097b68d884d31f | 2016-08-03 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 10V, Positive-QTOF | splash10-0udi-0590000000-9364feb7180f452b7057 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 20V, Positive-QTOF | splash10-004i-0900000000-fc7432ed65cac801520d | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 40V, Positive-QTOF | splash10-0076-9700000000-46bca3b429916ce99a62 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 10V, Negative-QTOF | splash10-000t-0900000000-6acb42168ea4c11caa5f | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 20V, Negative-QTOF | splash10-01ox-9800000000-a984067dad0d66b04cff | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (S)-Isowillardiine 40V, Negative-QTOF | splash10-0006-9000000000-d58ec88654546f7ffeb5 | 2021-09-23 | Wishart Lab | View Spectrum |
NMR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum |
IR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-) | 2023-02-03 | FELIX lab | View Spectrum | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+) | 2023-02-03 | FELIX lab | View Spectrum | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+) | 2023-02-03 | FELIX lab | View Spectrum |
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