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Showing metabocard for 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane (HMDB0061798)

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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2014-10-08 15:54:45 UTC
Update Date2022-03-07 03:17:47 UTC
HMDB IDHMDB0061798
Secondary Accession Numbers
  • HMDB61798
Metabolite Identification
Common Name1-Methyl-3-(2-methyl-1-propenyl)cyclopentane
Description1-Methyl-3-(2-methyl-1-propenyl)cyclopentane belongs to the class of organic compounds known as branched unsaturated hydrocarbons. These are hydrocarbons that contains one or more unsaturated carbon atoms, and an aliphatic branch. 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane is possibly neutral.
Structure
Data?1563866232
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0061798 (1-Methyl-3-(2-methyl-1-propenyl)cyclopentane)


  Mrv0541 10081412302D          

 10 10  0  0  0  0            999 V2000
    1.2822    3.1768    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9967    1.9393    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3297   -0.8227    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9803   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2352    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.9393    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0997    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2822    2.3518    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1553   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.1143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0  0  0  0
  8  1  1  0  0  0  0
  8  2  1  0  0  0  0
  8  6  2  0  0  0  0
  9  3  1  0  0  0  0
  9  4  1  0  0  0  0
  9  7  1  0  0  0  0
 10  5  1  0  0  0  0
 10  6  1  0  0  0  0
 10  7  1  0  0  0  0
M  END
Download

3D MOL for HMDB0061798 (1-Methyl-3-(2-methyl-1-propenyl)cyclopentane)

HMDB0061798
     RDKit          3D
1-Methyl-3-(2-methyl-1-propenyl)cyclopentane
 28 28  0  0  0  0  0  0  0  0999 V2000
   -2.7476    0.6623   -0.7385 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3547   -0.0577    0.4795 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3625   -0.4295    1.4865 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1056   -0.3757    0.6811 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0847   -0.0068   -0.3254 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5917   -1.2845   -0.7697 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0748   -1.0580   -0.6832 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2772    0.1386    0.2200 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4255    0.9611   -0.2552 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9815    0.8924    0.2377 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5737    0.0756   -1.6682 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8049    0.9761   -0.6527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1662    1.6112   -0.8763 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8930   -0.8122    2.4207 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9031    0.5002    1.7791 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0473   -1.1972    1.0817 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7770   -0.9068    1.5674 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5012    0.4841   -1.2131 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3133   -2.1519   -0.1120 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2524   -1.5763   -1.7866 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5596   -1.9309   -0.2390 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4505   -0.8821   -1.7105 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4601   -0.2209    1.2616 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2798    0.2788   -0.4466 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6920    1.6907    0.5618 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1264    1.5345   -1.1462 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1304    1.8101   -0.3948 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7064    1.2747    1.2410 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  8 10  1  0
 10  5  1  0
  1 11  1  0
  1 12  1  0
  1 13  1  0
  3 14  1  0
  3 15  1  0
  3 16  1  0
  4 17  1  0
  5 18  1  0
  6 19  1  0
  6 20  1  0
  7 21  1  0
  7 22  1  0
  8 23  1  0
  9 24  1  0
  9 25  1  0
  9 26  1  0
 10 27  1  0
 10 28  1  0
M  END
Download

3D SDF for HMDB0061798 (1-Methyl-3-(2-methyl-1-propenyl)cyclopentane)


  Mrv0541 10081412302D          

 10 10  0  0  0  0            999 V2000
    1.2822    3.1768    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9967    1.9393    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3297   -0.8227    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9803   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2352    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.9393    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0997    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2822    2.3518    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1553   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.1143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0  0  0  0
  8  1  1  0  0  0  0
  8  2  1  0  0  0  0
  8  6  2  0  0  0  0
  9  3  1  0  0  0  0
  9  4  1  0  0  0  0
  9  7  1  0  0  0  0
 10  5  1  0  0  0  0
 10  6  1  0  0  0  0
 10  7  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0061798

> <DATABASE_NAME>
hmdb

> <SMILES>
CC1CCC(C1)C=C(C)C

> <INCHI_IDENTIFIER>
InChI=1S/C10H18/c1-8(2)6-10-5-4-9(3)7-10/h6,9-10H,4-5,7H2,1-3H3

> <INCHI_KEY>
ZNVLSGKSXSJTNY-UHFFFAOYSA-N

> <FORMULA>
C10H18

> <MOLECULAR_WEIGHT>
138.2499

> <EXACT_MASS>
138.140850576

> <JCHEM_ACCEPTOR_COUNT>
0

> <JCHEM_ATOM_COUNT>
28

> <JCHEM_AVERAGE_POLARIZABILITY>
18.442917136158346

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
1-methyl-3-(2-methylprop-1-en-1-yl)cyclopentane

> <ALOGPS_LOGP>
4.55

> <JCHEM_LOGP>
3.567458462666666

> <ALOGPS_LOGS>
-3.44

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_POLAR_SURFACE_AREA>
0.0

> <JCHEM_REFRACTIVITY>
46.7028

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.98e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
1-methyl-3-(2-methylprop-1-en-1-yl)cyclopentane

> <JCHEM_VEBER_RULE>
1

$$$$
Download

3D-SDF for HMDB0061798 (1-Methyl-3-(2-methyl-1-propenyl)cyclopentane)

HMDB0061798
     RDKit          3D
1-Methyl-3-(2-methyl-1-propenyl)cyclopentane
 28 28  0  0  0  0  0  0  0  0999 V2000
   -2.7476    0.6623   -0.7385 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3547   -0.0577    0.4795 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3625   -0.4295    1.4865 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1056   -0.3757    0.6811 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0847   -0.0068   -0.3254 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5917   -1.2845   -0.7697 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0748   -1.0580   -0.6832 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2772    0.1386    0.2200 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4255    0.9611   -0.2552 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9815    0.8924    0.2377 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5737    0.0756   -1.6682 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8049    0.9761   -0.6527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1662    1.6112   -0.8763 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8930   -0.8122    2.4207 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9031    0.5002    1.7791 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0473   -1.1972    1.0817 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7770   -0.9068    1.5674 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5012    0.4841   -1.2131 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3133   -2.1519   -0.1120 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2524   -1.5763   -1.7866 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5596   -1.9309   -0.2390 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4505   -0.8821   -1.7105 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4601   -0.2209    1.2616 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2798    0.2788   -0.4466 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6920    1.6907    0.5618 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1264    1.5345   -1.1462 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1304    1.8101   -0.3948 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7064    1.2747    1.2410 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  8 10  1  0
 10  5  1  0
  1 11  1  0
  1 12  1  0
  1 13  1  0
  3 14  1  0
  3 15  1  0
  3 16  1  0
  4 17  1  0
  5 18  1  0
  6 19  1  0
  6 20  1  0
  7 21  1  0
  7 22  1  0
  8 23  1  0
  9 24  1  0
  9 25  1  0
  9 26  1  0
 10 27  1  0
 10 28  1  0
M  END
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PDB for HMDB0061798 (1-Methyl-3-(2-methyl-1-propenyl)cyclopentane)

HEADER    PROTEIN                                 08-OCT-14   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-OCT-14         0                                  
HETATM    1  C   UNK     0       2.393   5.930   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.727   3.620   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.615  -1.536   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.830  -0.290   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.306   1.175   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.060   3.620   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.186   1.175   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.393   4.390   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.290  -0.290   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.060   2.080   0.000  0.00  0.00           C+0
CONECT    1    8                                                            
CONECT    2    8                                                            
CONECT    3    9                                                            
CONECT    4    5    9                                                       
CONECT    5    4   10                                                       
CONECT    6    8   10                                                       
CONECT    7    9   10                                                       
CONECT    8    1    2    6                                                  
CONECT    9    3    4    7                                                  
CONECT   10    5    6    7                                                  
MASTER        0    0    0    0    0    0    0    0   10    0   20    0
END
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3D PDB for HMDB0061798 (1-Methyl-3-(2-methyl-1-propenyl)cyclopentane)

COMPND    HMDB0061798
HETATM    1  C1  UNL     1      -2.748   0.662  -0.739  1.00  0.00           C  
HETATM    2  C2  UNL     1      -2.355  -0.058   0.480  1.00  0.00           C  
HETATM    3  C3  UNL     1      -3.362  -0.430   1.486  1.00  0.00           C  
HETATM    4  C4  UNL     1      -1.106  -0.376   0.681  1.00  0.00           C  
HETATM    5  C5  UNL     1      -0.085  -0.007  -0.325  1.00  0.00           C  
HETATM    6  C6  UNL     1       0.592  -1.285  -0.770  1.00  0.00           C  
HETATM    7  C7  UNL     1       2.075  -1.058  -0.683  1.00  0.00           C  
HETATM    8  C8  UNL     1       2.277   0.139   0.220  1.00  0.00           C  
HETATM    9  C9  UNL     1       3.426   0.961  -0.255  1.00  0.00           C  
HETATM   10  C10 UNL     1       0.981   0.892   0.238  1.00  0.00           C  
HETATM   11  H1  UNL     1      -2.574   0.076  -1.668  1.00  0.00           H  
HETATM   12  H2  UNL     1      -3.805   0.976  -0.653  1.00  0.00           H  
HETATM   13  H3  UNL     1      -2.166   1.611  -0.876  1.00  0.00           H  
HETATM   14  H4  UNL     1      -2.893  -0.812   2.421  1.00  0.00           H  
HETATM   15  H5  UNL     1      -3.903   0.500   1.779  1.00  0.00           H  
HETATM   16  H6  UNL     1      -4.047  -1.197   1.082  1.00  0.00           H  
HETATM   17  H7  UNL     1      -0.777  -0.907   1.567  1.00  0.00           H  
HETATM   18  H8  UNL     1      -0.501   0.484  -1.213  1.00  0.00           H  
HETATM   19  H9  UNL     1       0.313  -2.152  -0.112  1.00  0.00           H  
HETATM   20  H10 UNL     1       0.252  -1.576  -1.787  1.00  0.00           H  
HETATM   21  H11 UNL     1       2.560  -1.931  -0.239  1.00  0.00           H  
HETATM   22  H12 UNL     1       2.450  -0.882  -1.711  1.00  0.00           H  
HETATM   23  H13 UNL     1       2.460  -0.221   1.262  1.00  0.00           H  
HETATM   24  H14 UNL     1       4.280   0.279  -0.447  1.00  0.00           H  
HETATM   25  H15 UNL     1       3.692   1.691   0.562  1.00  0.00           H  
HETATM   26  H16 UNL     1       3.126   1.535  -1.146  1.00  0.00           H  
HETATM   27  H17 UNL     1       1.130   1.810  -0.395  1.00  0.00           H  
HETATM   28  H18 UNL     1       0.706   1.275   1.241  1.00  0.00           H  
CONECT    1    2   11   12   13
CONECT    2    3    4    4
CONECT    3   14   15   16
CONECT    4    5   17
CONECT    5    6   10   18
CONECT    6    7   19   20
CONECT    7    8   21   22
CONECT    8    9   10   23
CONECT    9   24   25   26
CONECT   10   27   28
END
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SMILES for HMDB0061798 (1-Methyl-3-(2-methyl-1-propenyl)cyclopentane)

CC1CCC(C1)C=C(C)C
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INCHI for HMDB0061798 (1-Methyl-3-(2-methyl-1-propenyl)cyclopentane)

InChI=1S/C10H18/c1-8(2)6-10-5-4-9(3)7-10/h6,9-10H,4-5,7H2,1-3H3
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View in JSmolView Stereo Labels
SynonymsNot Available
Chemical FormulaC10H18
Average Molecular Weight138.2499
Monoisotopic Molecular Weight138.140850576
IUPAC Name1-methyl-3-(2-methylprop-1-en-1-yl)cyclopentane
Traditional Name1-methyl-3-(2-methylprop-1-en-1-yl)cyclopentane
CAS Registry NumberNot Available
SMILES
CC1CCC(C1)C=C(C)C
InChI Identifier
InChI=1S/C10H18/c1-8(2)6-10-5-4-9(3)7-10/h6,9-10H,4-5,7H2,1-3H3
InChI KeyZNVLSGKSXSJTNY-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as branched unsaturated hydrocarbons. These are hydrocarbons that contains one or more unsaturated carbon atoms, and an aliphatic branch.
KingdomOrganic compounds
Super ClassHydrocarbons
ClassUnsaturated hydrocarbons
Sub ClassBranched unsaturated hydrocarbons
Direct ParentBranched unsaturated hydrocarbons
Alternative Parents
Substituents
  • Branched unsaturated hydrocarbon
  • Cyclic olefin
  • Unsaturated aliphatic hydrocarbon
  • Olefin
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Biological locationSource
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.05 g/LALOGPS
logP4.55ALOGPS
logP3.57ChemAxon
logS-3.4ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity46.7 m³·mol⁻¹ChemAxon
Polarizability18.44 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+134.05531661259
DarkChem[M-H]-130.57631661259
DeepCCS[M+H]+138.33730932474
DeepCCS[M-H]-135.51830932474
DeepCCS[M-2H]-172.26230932474
DeepCCS[M+Na]+147.55530932474
AllCCS[M+H]+129.032859911
AllCCS[M+H-H2O]+124.532859911
AllCCS[M+NH4]+133.232859911
AllCCS[M+Na]+134.432859911
AllCCS[M-H]-135.532859911
AllCCS[M+Na-2H]-137.432859911
AllCCS[M+HCOO]-139.632859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.5.96 minutes32390414
Predicted by Siyang on May 30, 202218.7254 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20222.45 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2384.5 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid713.1 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid262.7 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid455.5 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid375.2 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid755.3 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid813.0 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)216.9 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1524.4 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid573.8 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1416.6 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid553.0 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid479.4 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate624.9 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA615.5 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water12.0 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
1-Methyl-3-(2-methyl-1-propenyl)cyclopentaneCC1CCC(C1)C=C(C)C1170.6Standard polar33892256
1-Methyl-3-(2-methyl-1-propenyl)cyclopentaneCC1CCC(C1)C=C(C)C966.7Standard non polar33892256
1-Methyl-3-(2-methyl-1-propenyl)cyclopentaneCC1CCC(C1)C=C(C)C961.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane GC-MS (Non-derivatized) - 70eV, Positivesplash10-059t-9300000000-07710b9d2f5d1b7d456d2017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 10V, Positive-QTOFsplash10-000i-3900000000-6d0a84b764c17541028c2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 20V, Positive-QTOFsplash10-053j-9400000000-9b62385d6ab3d0e3c13b2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 40V, Positive-QTOFsplash10-0a4i-9000000000-9e353d764432447d826b2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 10V, Negative-QTOFsplash10-000i-0900000000-f2afa3fab3e729ef37b62017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 20V, Negative-QTOFsplash10-000i-1900000000-b1e5b040ed364fe113e62017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 40V, Negative-QTOFsplash10-05g0-6900000000-fa18047cbcb65cdf5d222017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 10V, Negative-QTOFsplash10-000i-0900000000-005b492eed114057487d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 20V, Negative-QTOFsplash10-000i-0900000000-005b492eed114057487d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 40V, Negative-QTOFsplash10-000i-4900000000-9f4c7e6b32bf62b59cb72021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 10V, Positive-QTOFsplash10-001i-9000000000-90b97ce486bea454fdc22021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 20V, Positive-QTOFsplash10-0a4i-9000000000-d847c835ce975068addb2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-Methyl-3-(2-methyl-1-propenyl)cyclopentane 40V, Positive-QTOFsplash10-0a5c-9000000000-fd95bb1168e453774a7c2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Saliva
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
SalivaDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Not SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound522602
PDB IDNot Available
ChEBI ID90013
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available