| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2017-09-09 04:10:26 UTC |
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| Update Date | 2022-11-30 19:26:07 UTC |
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| HMDB ID | HMDB0115264 |
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| Secondary Accession Numbers | None |
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| Metabolite Identification |
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| Common Name | PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) |
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| Description | PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)), in particular, consists of one chain of behenic acid at the C-1 position and one chain of osbond acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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| Structure | [H][C@@](COC(=O)CCCCCCCCCCCCCCCCCCCCC)(COP(O)(O)=O)OC(=O)CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCCC InChI=1S/C47H83O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-37-39-41-46(48)53-43-45(44-54-56(50,51)52)55-47(49)42-40-38-36-34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h12,14,18,20,24,26,30,32,36,38,45H,3-11,13,15-17,19,21-23,25,27-29,31,33-35,37,39-44H2,1-2H3,(H2,50,51,52)/b14-12-,20-18-,26-24-,32-30-,38-36-/t45-/m1/s1 |
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| Synonyms | | Value | Source |
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| 1-Behenoyl-2-osbondoyl-sn-glycero-3-phosphate | HMDB | | 1-Behenoyl-2-osbondoyl-sn-phosphatidic acid | HMDB | | PA(22:0/22:5) | HMDB | | PA(22:0/22:5N6) | HMDB | | PA(22:0/22:5W6) | HMDB | | PA(44:5) | HMDB | | Phosphatidic acid(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) | HMDB | | Phosphatidic acid(22:0/22:5) | HMDB | | Phosphatidic acid(22:0/22:5n6) | HMDB | | Phosphatidic acid(22:0/22:5W6) | HMDB | | Phosphatidic acid(44:5) | HMDB | | Phosphatidate(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) | HMDB | | Phosphatidate(22:0/22:5) | HMDB | | Phosphatidate(22:0/22:5N6) | HMDB | | Phosphatidate(22:0/22:5W6) | HMDB | | Phosphatidate(44:5) | HMDB | | [(2R)-2-[(4Z,7Z,10Z,16Z)-Docosa-4,7,10,13,16-pentaenoyloxy]-3-(docosanoyloxy)propoxy]phosphonate | HMDB | | 1-behenoyl-2-osbondoyl-sn-glycero-3-phosphate | SMPDB, HMDB | | 1-behenoyl-2-osbondoyl-sn-phosphatidic acid | SMPDB, HMDB | | PA(22:0/22:5) | SMPDB, HMDB | | PA(22:0/22:5n6) | SMPDB, HMDB | | PA(22:0/22:5w6) | SMPDB, HMDB | | PA(44:5) | SMPDB, HMDB | | Phosphatidic acid(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) | SMPDB, HMDB | | Phosphatidic acid(22:0/22:5) | SMPDB, HMDB | | Phosphatidic acid(22:0/22:5n6) | SMPDB, HMDB | | Phosphatidic acid(22:0/22:5w6) | SMPDB, HMDB | | Phosphatidic acid(44:5) | SMPDB, HMDB | | Phosphatidate(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) | SMPDB, HMDB | | Phosphatidate(22:0/22:5) | SMPDB, HMDB | | Phosphatidate(22:0/22:5n6) | SMPDB, HMDB | | Phosphatidate(22:0/22:5w6) | SMPDB, HMDB | | PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) | SMPDB |
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| Chemical Formula | C47H83O8P |
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| Average Molecular Weight | 807.147 |
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| Monoisotopic Molecular Weight | 806.582556631 |
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| IUPAC Name | [(2R)-2-[(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoyloxy]-3-(docosanoyloxy)propoxy]phosphonic acid |
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| Traditional Name | (2R)-2-[(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoyloxy]-3-(docosanoyloxy)propoxyphosphonic acid |
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| CAS Registry Number | Not Available |
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| SMILES | [H][C@@](COC(=O)CCCCCCCCCCCCCCCCCCCCC)(COP(O)(O)=O)OC(=O)CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCCC |
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| InChI Identifier | InChI=1S/C47H83O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-37-39-41-46(48)53-43-45(44-54-56(50,51)52)55-47(49)42-40-38-36-34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h12,14,18,20,24,26,30,32,36,38,45H,3-11,13,15-17,19,21-23,25,27-29,31,33-35,37,39-44H2,1-2H3,(H2,50,51,52)/b14-12-,20-18-,26-24-,32-30-,38-36-/t45-/m1/s1 |
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| InChI Key | JSDXUBXAMRWCMA-CFCAVWKNSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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| Kingdom | Organic compounds |
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| Super Class | Lipids and lipid-like molecules |
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| Class | Glycerophospholipids |
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| Sub Class | Glycerophosphates |
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| Direct Parent | 1,2-diacylglycerol-3-phosphates |
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| Alternative Parents | |
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| Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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| Molecular Framework | Aliphatic acyclic compounds |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0068270)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0077016)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/24:0) (PathBank: SMP0092293)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/24:1(15Z)) (PathBank: SMP0068273)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0092292)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/22:0) (PathBank: SMP0019918)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/14:1(9Z)) (PathBank: SMP0019920)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/16:1(9Z)) (PathBank: SMP0019921)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/18:1(11Z)) (PathBank: SMP0019922)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/18:1(9Z)) (PathBank: SMP0019923)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/20:1(11Z)) (PathBank: SMP0019924)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/20:3(5Z,8Z,11Z)) (PathBank: SMP0019925)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/22:1(13Z)) (PathBank: SMP0019926)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/18:2(9Z,12Z)) (PathBank: SMP0019928)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/18:3(6Z,9Z,12Z)) (PathBank: SMP0019929)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0019930)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/22:2(13Z,16Z)) (PathBank: SMP0019931)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/22:4(7Z,10Z,13Z,16Z)) (PathBank: SMP0019932)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/18:3(9Z,12Z,15Z)) (PathBank: SMP0019934)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/18:4(6Z,9Z,12Z,15Z)) (PathBank: SMP0019935)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0019936)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0019937)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/20:2(11Z,14Z)) (PathBank: SMP0036307)
- De Novo Triacylglycerol Biosynthesis TG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/20:3(8Z,11Z,14Z)) (PathBank: SMP0036308)
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| Role | Not Available |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. | 6.01 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 43.1134 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 1.95 minutes | 32390414 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 5932.1 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 693.6 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 409.6 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 362.7 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 1342.6 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 2226.7 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 1427.2 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 227.9 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 4356.5 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 1363.1 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 3358.9 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 1672.9 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 864.5 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 677.0 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 983.7 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 11.8 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatized| Metabolite | SMILES | Kovats RI Value | Column Type | Reference |
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| PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) | [H][C@@](COC(=O)CCCCCCCCCCCCCCCCCCCCC)(COP(O)(O)=O)OC(=O)CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCCC | 5502.8 | Standard polar | 33892256 | | PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) | [H][C@@](COC(=O)CCCCCCCCCCCCCCCCCCCCC)(COP(O)(O)=O)OC(=O)CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCCC | 5057.4 | Standard non polar | 33892256 | | PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) | [H][C@@](COC(=O)CCCCCCCCCCCCCCCCCCCCC)(COP(O)(O)=O)OC(=O)CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCCC | 5746.0 | Semi standard non polar | 33892256 |
Derivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCC(=O)O[C@H](COC(=O)CCCCCCCCCCCCCCCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 5747.0 | Semi standard non polar | 33892256 | | PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCC(=O)O[C@H](COC(=O)CCCCCCCCCCCCCCCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 5043.0 | Standard non polar | 33892256 | | PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCC(=O)O[C@H](COC(=O)CCCCCCCCCCCCCCCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 6138.4 | Standard polar | 33892256 |
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| MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 10V, Positive-QTOF | splash10-0c29-1019500320-d2d03c584024210e39eb | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 20V, Positive-QTOF | splash10-022a-2139200300-c484b6168122d972784f | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 40V, Positive-QTOF | splash10-000t-1059001200-f271f5405939c75430b4 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 10V, Negative-QTOF | splash10-00bi-3009200020-cde4f4399f851ba38d72 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 20V, Negative-QTOF | splash10-004i-9005000000-bd9f0f6148d382b0a23d | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 40V, Negative-QTOF | splash10-004i-9000000000-00cfb303a117eaf7d77e | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 10V, Positive-QTOF | splash10-052r-0000000950-390383d28249724eaa55 | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 20V, Positive-QTOF | splash10-0a4i-0000000790-27ef6cb596585447be89 | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 40V, Positive-QTOF | splash10-0ar0-0000900710-123b3fa6716a8b05a061 | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 10V, Negative-QTOF | splash10-0a4i-0000000090-458f4a2322e886b5d23f | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 20V, Negative-QTOF | splash10-056r-0006900040-6414fe3270aaba9d2bbb | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 40V, Negative-QTOF | splash10-004r-0009300000-a3c3e09d2cb4af5b7054 | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 10V, Positive-QTOF | splash10-004i-0000000090-4221e2cbfa508741075c | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 20V, Positive-QTOF | splash10-0060-0000000990-f136e0aee4943f15a0bc | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(22:0/22:5(4Z,7Z,10Z,13Z,16Z)) 40V, Positive-QTOF | splash10-05s1-0000960350-2d7624dda53dba0fa327 | 2021-09-23 | Wishart Lab | View Spectrum |
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