| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2017-09-09 05:37:53 UTC |
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| Update Date | 2022-11-30 19:26:19 UTC |
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| HMDB ID | HMDB0115730 |
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| Secondary Accession Numbers | None |
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| Metabolite Identification |
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| Common Name | PA(a-21:0/a-17:0) |
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| Description | PA(a-21:0/a-17:0) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(a-21:0/a-17:0), in particular, consists of one chain of anteisoheneicosanoic acid at the C-1 position and one chain of anteisoheptadecanoic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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| Structure | [H][C@@](COC(=O)CCCCCCCCCCCCCCCCC(C)CC)(COP(O)(O)=O)OC(=O)CCCCCCCCCCCCC(C)CC InChI=1S/C41H81O8P/c1-5-37(3)31-27-23-19-15-11-9-7-8-10-12-17-21-25-29-33-40(42)47-35-39(36-48-50(44,45)46)49-41(43)34-30-26-22-18-14-13-16-20-24-28-32-38(4)6-2/h37-39H,5-36H2,1-4H3,(H2,44,45,46)/t37?,38?,39-/m1/s1 |
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| Synonyms | | Value | Source |
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| 1-Anteisoheneicosanoyl-2-anteisoheptadecanoyl-sn-glycero-3-phosphate | HMDB | | 1-Anteisoheneicosanoyl-2-anteisoheptadecanoyl-sn-phosphatidic acid | HMDB | | PA(38:0) | HMDB | | Phosphatidic acid(a-21:0/a-17:0) | HMDB | | Phosphatidic acid(38:0) | HMDB | | Phosphatidate(A-21:0/A-17:0) | HMDB | | Phosphatidate(38:0) | HMDB | | [(2R)-2-[(14-Methylhexadecanoyl)oxy]-3-[(18-methylicosanoyl)oxy]propoxy]phosphonate | HMDB | | PA(a-21:0/a-17:0) | SMPDB |
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| Chemical Formula | C41H81O8P |
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| Average Molecular Weight | 733.065 |
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| Monoisotopic Molecular Weight | 732.566906566 |
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| IUPAC Name | [(2R)-2-[(14-methylhexadecanoyl)oxy]-3-[(18-methylicosanoyl)oxy]propoxy]phosphonic acid |
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| Traditional Name | (2R)-2-[(14-methylhexadecanoyl)oxy]-3-[(18-methylicosanoyl)oxy]propoxyphosphonic acid |
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| CAS Registry Number | Not Available |
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| SMILES | [H][C@@](COC(=O)CCCCCCCCCCCCCCCCC(C)CC)(COP(O)(O)=O)OC(=O)CCCCCCCCCCCCC(C)CC |
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| InChI Identifier | InChI=1S/C41H81O8P/c1-5-37(3)31-27-23-19-15-11-9-7-8-10-12-17-21-25-29-33-40(42)47-35-39(36-48-50(44,45)46)49-41(43)34-30-26-22-18-14-13-16-20-24-28-32-38(4)6-2/h37-39H,5-36H2,1-4H3,(H2,44,45,46)/t37?,38?,39-/m1/s1 |
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| InChI Key | WIWVMBXOQJLNDJ-DFCGPKRUSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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| Kingdom | Organic compounds |
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| Super Class | Lipids and lipid-like molecules |
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| Class | Glycerophospholipids |
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| Sub Class | Glycerophosphates |
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| Direct Parent | 1,2-diacylglycerol-3-phosphates |
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| Alternative Parents | |
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| Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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| Molecular Framework | Aliphatic acyclic compounds |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | |
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| Role | Not Available |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 10.05 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 37.5651 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 2.26 minutes | 32390414 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 5255.3 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 746.5 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 405.4 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 275.4 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 1062.2 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 1929.1 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 1707.8 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 144.0 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 3652.0 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 1173.4 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 3111.9 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 1380.3 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 776.0 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 719.1 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 824.8 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 9.7 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| PA(a-21:0/a-17:0),1TMS,isomer #1 | CCC(C)CCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCCC(C)CC | 5060.9 | Semi standard non polar | 33892256 | | PA(a-21:0/a-17:0),1TMS,isomer #1 | CCC(C)CCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCCC(C)CC | 4348.7 | Standard non polar | 33892256 | | PA(a-21:0/a-17:0),1TMS,isomer #1 | CCC(C)CCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCCC(C)CC | 5896.7 | Standard polar | 33892256 | | PA(a-21:0/a-17:0),2TMS,isomer #1 | CCC(C)CCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCCC(C)CC | 5039.9 | Semi standard non polar | 33892256 | | PA(a-21:0/a-17:0),2TMS,isomer #1 | CCC(C)CCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCCC(C)CC | 4340.1 | Standard non polar | 33892256 | | PA(a-21:0/a-17:0),2TMS,isomer #1 | CCC(C)CCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCCC(C)CC | 5213.2 | Standard polar | 33892256 | | PA(a-21:0/a-17:0),1TBDMS,isomer #1 | CCC(C)CCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCCCCCC(C)CC | 5277.3 | Semi standard non polar | 33892256 | | PA(a-21:0/a-17:0),1TBDMS,isomer #1 | CCC(C)CCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCCCCCC(C)CC | 4473.4 | Standard non polar | 33892256 | | PA(a-21:0/a-17:0),1TBDMS,isomer #1 | CCC(C)CCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCCCCCC(C)CC | 5862.7 | Standard polar | 33892256 |
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| MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 10V, Positive-QTOF | splash10-0r0r-2197804800-29bbc929c6cd0823e75f | 2019-02-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 20V, Positive-QTOF | splash10-0pvj-4296304100-30df7ad0ae971e23f7f5 | 2019-02-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 40V, Positive-QTOF | splash10-07cr-5079045000-b8e029387647da26d073 | 2019-02-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 10V, Negative-QTOF | splash10-004i-4039400300-7cd19f1f118cf2b88601 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 20V, Negative-QTOF | splash10-004i-9014000000-9d64430a11b7a997a352 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 40V, Negative-QTOF | splash10-004i-9000000000-5835ebeb8cc8f4a8cc75 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 10V, Negative-QTOF | splash10-001i-0000000900-7697f25f15a1cbc32c41 | 2021-09-21 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 20V, Negative-QTOF | splash10-07gi-0033900400-93e23effbe9aa79ae897 | 2021-09-21 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 40V, Negative-QTOF | splash10-00or-1169600100-188813dbd71a7e144681 | 2021-09-21 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 10V, Positive-QTOF | splash10-0a4i-0000000900-e09378df2d3942cf355c | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 20V, Positive-QTOF | splash10-0a4i-0000009900-f5a47f8411b3a51c5d29 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 40V, Positive-QTOF | splash10-0a70-0000922400-10d6cdf92237334d5cf6 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 10V, Positive-QTOF | splash10-0159-0000000900-10746a3c22d7c4446b6b | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 20V, Positive-QTOF | splash10-001r-0000005900-84de080f8ec089046cdc | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(a-21:0/a-17:0) 40V, Positive-QTOF | splash10-06ri-0000906200-8a9792570d329fd54b1c | 2021-09-25 | Wishart Lab | View Spectrum |
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