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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-07 06:51:18 UTC
Update Date2021-09-26 22:50:25 UTC
HMDB IDHMDB0242714
Secondary Accession NumbersNone
Metabolite Identification
Common Name(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid
Description(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid belongs to the class of organic compounds known as valine and derivatives. Valine and derivatives are compounds containing valine or a derivative thereof resulting from reaction of valine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom. Based on a literature review very few articles have been published on (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). (2r)-2-amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoateGenerator
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulphanylbutanoateGenerator
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulphanylbutanoic acidGenerator
Chemical FormulaC7H12N2O4S
Average Molecular Weight220.24
Monoisotopic Molecular Weight220.051778048
IUPAC Name2-amino-3-methyl-3-[(2-nitrosoacetyl)sulfanyl]butanoic acid
Traditional Name2-amino-3-methyl-3-[(2-nitrosoacetyl)sulfanyl]butanoic acid
CAS Registry NumberNot Available
SMILES
CC(C)(SC(=O)CN=O)C(N)C(O)=O
InChI Identifier
InChI=1S/C7H12N2O4S/c1-7(2,5(8)6(11)12)14-4(10)3-9-13/h5H,3,8H2,1-2H3,(H,11,12)
InChI KeyLPQSWWYVVYRQCA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as valine and derivatives. Valine and derivatives are compounds containing valine or a derivative thereof resulting from reaction of valine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentValine and derivatives
Alternative Parents
Substituents
  • Valine or derivatives
  • Alpha-amino acid
  • Methyl-branched fatty acid
  • Thia fatty acid
  • Branched fatty acid
  • Fatty acyl
  • Fatty acid
  • Amino acid
  • Carbothioic s-ester
  • Thiocarboxylic acid ester
  • Organic nitroso compound
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Sulfenyl compound
  • Thiocarboxylic acid or derivatives
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • C-nitroso compound
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary amine
  • Organosulfur compound
  • Organooxygen compound
  • Organonitrogen compound
  • Primary aliphatic amine
  • Carbonyl group
  • Amine
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-1.4ALOGPS
logP-2.6ChemAxon
logS-1.5ALOGPS
pKa (Strongest Acidic)1.71ChemAxon
pKa (Strongest Basic)8.44ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area109.82 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity49.97 m³·mol⁻¹ChemAxon
Polarizability20.14 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+145.56530932474
DeepCCS[M-H]-141.73730932474
DeepCCS[M-2H]-179.00830932474
DeepCCS[M+Na]+154.62730932474

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Predicted by Siyang on May 30, 20229.9979 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20227.92 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid733.7 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid295.3 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid80.9 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid161.9 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid40.6 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid290.0 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid251.2 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)537.8 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid635.3 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid97.6 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid683.9 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid170.2 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid206.1 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate481.2 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA459.2 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water290.6 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acidCC(C)(SC(=O)CN=O)C(N)C(O)=O2293.5Standard polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acidCC(C)(SC(=O)CN=O)C(N)C(O)=O1642.3Standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acidCC(C)(SC(=O)CN=O)C(N)C(O)=O1924.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TMS,isomer #1CC(C)(SC(=O)CN=O)C(N[Si](C)(C)C)C(=O)O[Si](C)(C)C1846.4Semi standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TMS,isomer #1CC(C)(SC(=O)CN=O)C(N[Si](C)(C)C)C(=O)O[Si](C)(C)C1823.0Standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TMS,isomer #1CC(C)(SC(=O)CN=O)C(N[Si](C)(C)C)C(=O)O[Si](C)(C)C2462.3Standard polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TMS,isomer #2CC(C)(SC(=O)CN=O)C(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C1936.2Semi standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TMS,isomer #2CC(C)(SC(=O)CN=O)C(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C1885.0Standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TMS,isomer #2CC(C)(SC(=O)CN=O)C(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2614.5Standard polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,3TMS,isomer #1CC(C)(SC(=O)CN=O)C(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1971.2Semi standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,3TMS,isomer #1CC(C)(SC(=O)CN=O)C(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1983.7Standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,3TMS,isomer #1CC(C)(SC(=O)CN=O)C(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2266.3Standard polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TBDMS,isomer #1CC(C)(SC(=O)CN=O)C(N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2283.9Semi standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TBDMS,isomer #1CC(C)(SC(=O)CN=O)C(N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2247.1Standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TBDMS,isomer #1CC(C)(SC(=O)CN=O)C(N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2605.7Standard polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TBDMS,isomer #2CC(C)(SC(=O)CN=O)C(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2407.2Semi standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TBDMS,isomer #2CC(C)(SC(=O)CN=O)C(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2297.4Standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,2TBDMS,isomer #2CC(C)(SC(=O)CN=O)C(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2699.3Standard polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,3TBDMS,isomer #1CC(C)(SC(=O)CN=O)C(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2660.0Semi standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,3TBDMS,isomer #1CC(C)(SC(=O)CN=O)C(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2567.5Standard non polar33892256
(2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid,3TBDMS,isomer #1CC(C)(SC(=O)CN=O)C(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2554.9Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-00dl-9200000000-7fa22bfded6459bfd77e2021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid 10V, Positive-QTOFsplash10-00xr-6960000000-2182a55dee1724724f9c2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid 20V, Positive-QTOFsplash10-05g3-9300000000-39c941fd3abc6eccbd5e2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid 40V, Positive-QTOFsplash10-05fu-9100000000-12a2c2436ec35bd3e2692021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid 10V, Negative-QTOFsplash10-0f89-9800000000-632bc42449f74e84d93b2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid 20V, Negative-QTOFsplash10-001i-9100000000-45f34bcec52b58d3c10c2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R)-2-Amino-3-methyl-3-(2-nitrosoacetyl)sulfanylbutanoic acid 40V, Negative-QTOFsplash10-001i-9100000000-e044fc2800490fda25b62021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID11258903
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound22242589
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]