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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-10 23:22:33 UTC
Update Date2021-09-26 22:55:22 UTC
HMDB IDHMDB0246348
Secondary Accession NumbersNone
Metabolite Identification
Common Name4-Amino-4-deoxyarabinose
Description4-Amino-4-deoxyarabinose belongs to the class of organic compounds known as monosaccharides. Monosaccharides are compounds containing one carbohydrate unit not glycosidically linked to another such unit, and no set of two or more glycosidically linked carbohydrate units. Monosaccharides have the general formula CnH2nOn. Based on a literature review a significant number of articles have been published on 4-Amino-4-deoxyarabinose. This compound has been identified in human blood as reported by (PMID: 31557052 ). 4-amino-4-deoxyarabinose is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 4-Amino-4-deoxyarabinose is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC5H11NO4
Average Molecular Weight149.146
Monoisotopic Molecular Weight149.068807838
IUPAC Name4-amino-2,3,5-trihydroxypentanal
Traditional Name4-amino-2,3,5-trihydroxypentanal
CAS Registry NumberNot Available
SMILES
NC(CO)C(O)C(O)C=O
InChI Identifier
InChI=1S/C5H11NO4/c6-3(1-7)5(10)4(9)2-8/h2-5,7,9-10H,1,6H2
InChI KeyYECZZWUIAXEARY-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as monosaccharides. Monosaccharides are compounds containing one carbohydrate unit not glycosidically linked to another such unit, and no set of two or more glycosidically linked carbohydrate units. Monosaccharides have the general formula CnH2nOn.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentMonosaccharides
Alternative Parents
Substituents
  • Beta-hydroxy aldehyde
  • Monosaccharide
  • 1,3-aminoalcohol
  • Alpha-hydroxyaldehyde
  • 1,2-aminoalcohol
  • Secondary alcohol
  • Polyol
  • Organic nitrogen compound
  • Primary alcohol
  • Organonitrogen compound
  • Primary amine
  • Primary aliphatic amine
  • Carbonyl group
  • Hydrocarbon derivative
  • Amine
  • Aldehyde
  • Alcohol
  • Organic oxide
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-2.7ALOGPS
logP-3ChemAxon
logS0.32ALOGPS
pKa (Strongest Acidic)12.48ChemAxon
pKa (Strongest Basic)8.49ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area103.78 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity33.04 m³·mol⁻¹ChemAxon
Polarizability13.86 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+132.53630932474
DeepCCS[M-H]-129.40930932474
DeepCCS[M-2H]-166.61630932474
DeepCCS[M+Na]+141.53330932474
AllCCS[M+H]+134.932859911
AllCCS[M+H-H2O]+130.932859911
AllCCS[M+NH4]+138.732859911
AllCCS[M+Na]+139.732859911
AllCCS[M-H]-125.332859911
AllCCS[M+Na-2H]-127.532859911
AllCCS[M+HCOO]-129.932859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Predicted by Siyang on May 30, 20229.4016 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20225.12 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid436.9 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid326.6 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid27.0 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid201.4 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid101.1 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid298.8 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid222.8 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)853.5 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid583.2 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid42.7 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid681.6 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid209.7 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid346.2 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate800.1 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA579.3 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water418.3 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
4-Amino-4-deoxyarabinoseNC(CO)C(O)C(O)C=O2748.5Standard polar33892256
4-Amino-4-deoxyarabinoseNC(CO)C(O)C(O)C=O1365.2Standard non polar33892256
4-Amino-4-deoxyarabinoseNC(CO)C(O)C(O)C=O1579.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
4-Amino-4-deoxyarabinose,4TMS,isomer #1C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(N)CO[Si](C)(C)C1760.0Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #1C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(N)CO[Si](C)(C)C1732.9Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #1C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(N)CO[Si](C)(C)C1968.7Standard polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #10C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(CO)N([Si](C)(C)C)[Si](C)(C)C1942.0Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #10C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(CO)N([Si](C)(C)C)[Si](C)(C)C1833.3Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #10C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(CO)N([Si](C)(C)C)[Si](C)(C)C2072.3Standard polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #11C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(CO)N([Si](C)(C)C)[Si](C)(C)C1942.3Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #11C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(CO)N([Si](C)(C)C)[Si](C)(C)C1833.1Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #11C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(CO)N([Si](C)(C)C)[Si](C)(C)C2104.7Standard polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #2C[Si](C)(C)NC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(C=O)O[Si](C)(C)C1740.2Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #2C[Si](C)(C)NC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(C=O)O[Si](C)(C)C1733.4Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #2C[Si](C)(C)NC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(C=O)O[Si](C)(C)C1708.6Standard polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #3C[Si](C)(C)NC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)=CO[Si](C)(C)C1807.3Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #3C[Si](C)(C)NC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)=CO[Si](C)(C)C1789.8Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #3C[Si](C)(C)NC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)=CO[Si](C)(C)C1941.1Standard polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #4C[Si](C)(C)OCC(C(O[Si](C)(C)C)C(O)C=O)N([Si](C)(C)C)[Si](C)(C)C1891.4Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #4C[Si](C)(C)OCC(C(O[Si](C)(C)C)C(O)C=O)N([Si](C)(C)C)[Si](C)(C)C1769.2Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #4C[Si](C)(C)OCC(C(O[Si](C)(C)C)C(O)C=O)N([Si](C)(C)C)[Si](C)(C)C1904.6Standard polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #5C[Si](C)(C)NC(CO[Si](C)(C)C)C(O)C(=CO[Si](C)(C)C)O[Si](C)(C)C1797.3Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #5C[Si](C)(C)NC(CO[Si](C)(C)C)C(O)C(=CO[Si](C)(C)C)O[Si](C)(C)C1770.1Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #5C[Si](C)(C)NC(CO[Si](C)(C)C)C(O)C(=CO[Si](C)(C)C)O[Si](C)(C)C1980.5Standard polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #6C[Si](C)(C)OCC(C(O)C(C=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1917.9Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #6C[Si](C)(C)OCC(C(O)C(C=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1779.1Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #6C[Si](C)(C)OCC(C(O)C(C=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1955.7Standard polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #7C[Si](C)(C)OC=C(O)C(O)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1957.5Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #7C[Si](C)(C)OC=C(O)C(O)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1873.7Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #7C[Si](C)(C)OC=C(O)C(O)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2090.5Standard polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #8C[Si](C)(C)NC(CO)C(O[Si](C)(C)C)C(=CO[Si](C)(C)C)O[Si](C)(C)C1799.5Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #8C[Si](C)(C)NC(CO)C(O[Si](C)(C)C)C(=CO[Si](C)(C)C)O[Si](C)(C)C1738.7Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #8C[Si](C)(C)NC(CO)C(O[Si](C)(C)C)C(=CO[Si](C)(C)C)O[Si](C)(C)C1951.2Standard polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #9C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(CO)N([Si](C)(C)C)[Si](C)(C)C1877.8Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #9C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(CO)N([Si](C)(C)C)[Si](C)(C)C1761.3Standard non polar33892256
4-Amino-4-deoxyarabinose,4TMS,isomer #9C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(CO)N([Si](C)(C)C)[Si](C)(C)C1850.5Standard polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #1C[Si](C)(C)NC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(=CO[Si](C)(C)C)O[Si](C)(C)C1797.0Semi standard non polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #1C[Si](C)(C)NC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(=CO[Si](C)(C)C)O[Si](C)(C)C1826.8Standard non polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #1C[Si](C)(C)NC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(=CO[Si](C)(C)C)O[Si](C)(C)C1812.7Standard polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #2C[Si](C)(C)OCC(C(O[Si](C)(C)C)C(C=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1917.6Semi standard non polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #2C[Si](C)(C)OCC(C(O[Si](C)(C)C)C(C=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1851.2Standard non polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #2C[Si](C)(C)OCC(C(O[Si](C)(C)C)C(C=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1719.1Standard polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #3C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1966.4Semi standard non polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #3C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1915.5Standard non polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #3C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1955.1Standard polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #4C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1976.7Semi standard non polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #4C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1914.3Standard non polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #4C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1970.9Standard polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #5C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(CO)N([Si](C)(C)C)[Si](C)(C)C1938.9Semi standard non polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #5C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(CO)N([Si](C)(C)C)[Si](C)(C)C1881.3Standard non polar33892256
4-Amino-4-deoxyarabinose,5TMS,isomer #5C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(CO)N([Si](C)(C)C)[Si](C)(C)C1928.9Standard polar33892256
4-Amino-4-deoxyarabinose,6TMS,isomer #1C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2009.4Semi standard non polar33892256
4-Amino-4-deoxyarabinose,6TMS,isomer #1C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1950.9Standard non polar33892256
4-Amino-4-deoxyarabinose,6TMS,isomer #1C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(CO[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C1849.1Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(N)CO[Si](C)(C)C(C)(C)C2569.2Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(N)CO[Si](C)(C)C(C)(C)C2455.6Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(N)CO[Si](C)(C)C(C)(C)C2377.7Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #10CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2740.8Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #10CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2599.7Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #10CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2444.5Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #11CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2794.0Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #11CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2578.6Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #11CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2448.2Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(C=O)O[Si](C)(C)C(C)(C)C2575.8Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(C=O)O[Si](C)(C)C(C)(C)C2444.2Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(C=O)O[Si](C)(C)C(C)(C)C2216.4Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)=CO[Si](C)(C)C(C)(C)C2643.5Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)=CO[Si](C)(C)C(C)(C)C2543.1Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)=CO[Si](C)(C)C(C)(C)C2391.5Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)OCC(C(O[Si](C)(C)C(C)(C)C)C(O)C=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2732.4Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)OCC(C(O[Si](C)(C)C(C)(C)C)C(O)C=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2496.3Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)OCC(C(O[Si](C)(C)C(C)(C)C)C(O)C=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2287.1Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #5CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O)C(=CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2653.3Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #5CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O)C(=CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2514.6Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #5CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O)C(=CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2404.1Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #6CC(C)(C)[Si](C)(C)OCC(C(O)C(C=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2768.8Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #6CC(C)(C)[Si](C)(C)OCC(C(O)C(C=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2512.6Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #6CC(C)(C)[Si](C)(C)OCC(C(O)C(C=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2326.0Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #7CC(C)(C)[Si](C)(C)OC=C(O)C(O)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2761.0Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #7CC(C)(C)[Si](C)(C)OC=C(O)C(O)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2631.2Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #7CC(C)(C)[Si](C)(C)OC=C(O)C(O)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2460.5Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #8CC(C)(C)[Si](C)(C)NC(CO)C(O[Si](C)(C)C(C)(C)C)C(=CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2624.9Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #8CC(C)(C)[Si](C)(C)NC(CO)C(O[Si](C)(C)C(C)(C)C)C(=CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2467.3Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #8CC(C)(C)[Si](C)(C)NC(CO)C(O[Si](C)(C)C(C)(C)C)C(=CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2364.8Standard polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #9CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2749.3Semi standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #9CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2491.3Standard non polar33892256
4-Amino-4-deoxyarabinose,4TBDMS,isomer #9CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2252.4Standard polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(=CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2810.5Semi standard non polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(=CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2688.0Standard non polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(=CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2377.1Standard polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #2CC(C)(C)[Si](C)(C)OCC(C(O[Si](C)(C)C(C)(C)C)C(C=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2966.2Semi standard non polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #2CC(C)(C)[Si](C)(C)OCC(C(O[Si](C)(C)C(C)(C)C)C(C=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2707.6Standard non polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #2CC(C)(C)[Si](C)(C)OCC(C(O[Si](C)(C)C(C)(C)C)C(C=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2280.5Standard polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2961.1Semi standard non polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2800.9Standard non polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2449.2Standard polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3012.0Semi standard non polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2785.2Standard non polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2451.3Standard polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2980.1Semi standard non polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2751.7Standard non polar33892256
4-Amino-4-deoxyarabinose,5TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(CO)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2409.6Standard polar33892256
4-Amino-4-deoxyarabinose,6TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3222.1Semi standard non polar33892256
4-Amino-4-deoxyarabinose,6TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2978.9Standard non polar33892256
4-Amino-4-deoxyarabinose,6TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2482.2Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (Non-derivatized) - 70eV, Positivesplash10-08fr-9100000000-72af1616451c407531152021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_1_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_1_5) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_5) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_6) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_7) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_8) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_9) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_10) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_2_11) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_3_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_3_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_3_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_3_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_3_5) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_3_6) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 4-Amino-4-deoxyarabinose GC-MS (TMS_3_7) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Amino-4-deoxyarabinose 10V, Positive-QTOFsplash10-0w30-1900000000-a0ad0df7d9e175018fa32021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Amino-4-deoxyarabinose 20V, Positive-QTOFsplash10-03di-9400000000-224f82fc71f94b25c1942021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Amino-4-deoxyarabinose 40V, Positive-QTOFsplash10-0006-9000000000-7d60d81c566aaeaf98f42021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Amino-4-deoxyarabinose 10V, Negative-QTOFsplash10-0a4l-9000000000-30750fb8ad90bd62da572021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Amino-4-deoxyarabinose 20V, Negative-QTOFsplash10-052f-9000000000-6747b29cfb2f2273ff7f2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Amino-4-deoxyarabinose 40V, Negative-QTOFsplash10-0a4l-9000000000-9f00278c3113cc68302d2021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound71437049
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]