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Identification Taxonomy Ontology Physical properties Spectra Biological properties Concentrations Links References enzymes (131)transporters (1) Show 132 proteins XML

enzymes (131)transporters (1) Show 132 proteins

Record Information

Version

5.0

Status

Predicted

Creation Date

2021-09-19 05:15:20 UTC

Update Date

2022-11-30 20:10:08 UTC

HMDB ID

HMDB0296945

Secondary Accession Numbers

None

Metabolite Identification

Common Name

DG(2:0/0:0/5-iso PGF2VI)

Description

DG(2:0/0:0/5-iso PGF2VI) belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid. Based on a literature review very few articles have been published on DG(2:0/0:0/5-iso PGF2VI).

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv1652309192107152D          

 31 31  0  0  1  0            999 V2000
    0.6582   -6.8020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0563   -7.2145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7708   -6.8020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0563   -8.0395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3726   -7.2145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0871   -6.8020    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8016   -7.2145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5160   -6.8020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2305   -7.2145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2305   -8.0395    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9450   -6.8020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6595   -7.2145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3739   -6.8020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3739   -5.9770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0884   -5.5645    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.1746   -4.7440    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.5615   -4.1919    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9816   -4.5724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3941   -5.2869    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.2146   -5.3732    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8421   -5.9000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.0136   -6.7070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4005   -7.2590    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5720   -8.0660    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.9589   -8.6180    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3567   -8.3209    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5282   -9.1279    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3128   -9.3828    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4843  -10.1898    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2690  -10.4447    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0871   -5.9770    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  1  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 15 14  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  1  0  0  0
 19 21  1  0  0  0  0
 15 21  1  0  0  0  0
 21 22  1  6  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
  6 31  1  1  0  0  0
M  END

HMDB0296945
     RDKit          3D
DG(2:0/0:0/5-iso PGF2VI)
 69 69  0  0  0  0  0  0  0  0999 V2000
   -7.4375    3.7252   -0.8341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5919    2.2487   -0.4950 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1898    1.6462   -0.4313 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3523    0.1908   -0.0964 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0454   -0.5487    0.0025 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2033    0.0756    1.0820 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.9052   -0.0196    2.2739 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9059   -0.6075    1.2679 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4309   -1.5613    0.4992 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1171   -2.2346    0.7094 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2696   -2.2078   -0.5393 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2146   -0.8344   -1.1700 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3592    0.0922   -0.1938 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4443    0.8196   -0.3103 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2653    0.7813   -1.5299 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6531    0.3152   -1.2255 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4571    0.2336   -2.1618 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9745    0.0041    0.0445 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1562   -0.4164    0.5650 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2689    0.5612    0.6437 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.9509    1.6670    1.4239 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8981    0.9618   -0.6372 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1417    1.5768   -0.4937 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3807    2.7622    0.1105 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7658    3.3447    0.2274 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4732    3.4618    0.6161 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9307   -3.2264   -1.4076 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1480   -3.6028   -2.4961 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1372   -4.3743   -0.4341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3106   -3.7233    0.9223 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3576   -4.2215    1.8302 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3544    4.2737   -0.6194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5677    4.0891   -0.2184 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0999    3.8206   -1.9021 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1402    1.7922   -1.3424 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1250    2.1828    0.4544 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6267    2.2247    0.2998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7671    1.7414   -1.4498 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9087   -0.2715   -0.9589 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9845    0.0194    0.7876 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5507   -0.5025   -0.9994 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2783   -1.6092    0.1986 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9826    1.1197    0.7819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1064    0.8857    2.6560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3006   -0.2907    2.1105 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0346   -1.8785   -0.3426 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5634   -1.8282    1.5573 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7406   -2.5253   -0.2905 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4330   -0.9348   -2.0489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2068   -0.5192   -1.5552 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1684    0.2187    0.7823 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7768    1.4920    0.5168 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8158    0.3206   -2.3980 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4160    1.8711   -1.8234 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5225   -1.3399    0.0061 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9907   -0.8214    1.6206 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1307    0.0413    1.2317 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7683    1.4249    2.3629 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2284    1.7531   -1.1390 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0279    0.1039   -1.3232 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.9205    4.0756   -0.5916 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.4741    2.4987    0.1168 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.8804    3.8188    1.2017 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9108   -2.8622   -1.7397 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7832   -3.7024   -2.2333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9899   -5.0073   -0.7120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1731   -4.9348   -0.4170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3299   -3.9701    1.2699 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3804   -3.6594    2.6417 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 20 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 24 26  2  0
 11 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  1  0
 30 31  1  0
 30 10  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  2 35  1  0
  2 36  1  0
  3 37  1  0
  3 38  1  0
  4 39  1  0
  4 40  1  0
  5 41  1  0
  5 42  1  0
  6 43  1  6
  7 44  1  0
  8 45  1  0
  9 46  1  0
 10 47  1  1
 11 48  1  1
 12 49  1  0
 12 50  1  0
 13 51  1  0
 14 52  1  0
 15 53  1  0
 15 54  1  0
 19 55  1  0
 19 56  1  0
 20 57  1  1
 21 58  1  0
 22 59  1  0
 22 60  1  0
 25 61  1  0
 25 62  1  0
 25 63  1  0
 27 64  1  6
 28 65  1  0
 29 66  1  0
 29 67  1  0
 30 68  1  1
 31 69  1  0
M  END


  Mrv1652309192107152D          

 31 31  0  0  1  0            999 V2000
    0.6582   -6.8020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0563   -7.2145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7708   -6.8020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0563   -8.0395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3726   -7.2145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0871   -6.8020    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8016   -7.2145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5160   -6.8020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2305   -7.2145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2305   -8.0395    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9450   -6.8020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6595   -7.2145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3739   -6.8020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3739   -5.9770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0884   -5.5645    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.1746   -4.7440    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.5615   -4.1919    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9816   -4.5724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3941   -5.2869    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.2146   -5.3732    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8421   -5.9000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.0136   -6.7070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4005   -7.2590    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5720   -8.0660    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.9589   -8.6180    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3567   -8.3209    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5282   -9.1279    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3128   -9.3828    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4843  -10.1898    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2690  -10.4447    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0871   -5.9770    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  1  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 15 14  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  1  0  0  0
 19 21  1  0  0  0  0
 15 21  1  0  0  0  0
 21 22  1  6  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
  6 31  1  1  0  0  0
M  END
> <DATABASE_ID>
HMDB0296945

> <DATABASE_NAME>
hmdb

> <SMILES>
CCCCC[C@@H](O)\C=C\[C@H]1[C@H](O)C[C@H](O)[C@H]1C\C=C/CC(=O)OC[C@H](O)COC(C)=O

> <INCHI_IDENTIFIER>
InChI=1S/C23H38O8/c1-3-4-5-8-17(25)11-12-20-19(21(27)13-22(20)28)9-6-7-10-23(29)31-15-18(26)14-30-16(2)24/h6-7,11-12,17-22,25-28H,3-5,8-10,13-15H2,1-2H3/b7-6-,12-11+/t17-,18-,19+,20-,21+,22-/m1/s1

> <INCHI_KEY>
QQDTZFRPFBHOJL-FPOGUXASSA-N

> <FORMULA>
C23H38O8

> <MOLECULAR_WEIGHT>
442.549

> <EXACT_MASS>
442.256668184

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
69

> <JCHEM_AVERAGE_POLARIZABILITY>
49.84253187865358

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2R)-3-(acetyloxy)-2-hydroxypropyl (3Z)-5-[(1S,2R,3R,5S)-3,5-dihydroxy-2-[(1E,3R)-3-hydroxyoct-1-en-1-yl]cyclopentyl]pent-3-enoate

> <ALOGPS_LOGP>
1.93

> <JCHEM_LOGP>
0.9884995996666669

> <ALOGPS_LOGS>
-3.33

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.556461762772638

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.577759351098237

> <JCHEM_PKA_STRONGEST_BASIC>
-1.626311506689726

> <JCHEM_POLAR_SURFACE_AREA>
133.52

> <JCHEM_REFRACTIVITY>
117.4441

> <JCHEM_ROTATABLE_BOND_COUNT>
16

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.08e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-3-(acetyloxy)-2-hydroxypropyl (3Z)-5-[(1S,2R,3R,5S)-3,5-dihydroxy-2-[(1E,3R)-3-hydroxyoct-1-en-1-yl]cyclopentyl]pent-3-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0296945
     RDKit          3D
DG(2:0/0:0/5-iso PGF2VI)
 69 69  0  0  0  0  0  0  0  0999 V2000
   -7.4375    3.7252   -0.8341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5919    2.2487   -0.4950 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1898    1.6462   -0.4313 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3523    0.1908   -0.0964 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0454   -0.5487    0.0025 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2033    0.0756    1.0820 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.9052   -0.0196    2.2739 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9059   -0.6075    1.2679 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4309   -1.5613    0.4992 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1171   -2.2346    0.7094 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2696   -2.2078   -0.5393 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2146   -0.8344   -1.1700 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3592    0.0922   -0.1938 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4443    0.8196   -0.3103 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2653    0.7813   -1.5299 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6531    0.3152   -1.2255 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4571    0.2336   -2.1618 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9745    0.0041    0.0445 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1562   -0.4164    0.5650 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2689    0.5612    0.6437 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.9509    1.6670    1.4239 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8981    0.9618   -0.6372 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1417    1.5768   -0.4937 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3807    2.7622    0.1105 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7658    3.3447    0.2274 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4732    3.4618    0.6161 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9307   -3.2264   -1.4076 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1480   -3.6028   -2.4961 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1372   -4.3743   -0.4341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3106   -3.7233    0.9223 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3576   -4.2215    1.8302 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3544    4.2737   -0.6194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5677    4.0891   -0.2184 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0999    3.8206   -1.9021 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1402    1.7922   -1.3424 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1250    2.1828    0.4544 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6267    2.2247    0.2998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7671    1.7414   -1.4498 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9087   -0.2715   -0.9589 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9845    0.0194    0.7876 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5507   -0.5025   -0.9994 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2783   -1.6092    0.1986 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9826    1.1197    0.7819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1064    0.8857    2.6560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3006   -0.2907    2.1105 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0346   -1.8785   -0.3426 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5634   -1.8282    1.5573 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7406   -2.5253   -0.2905 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4330   -0.9348   -2.0489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2068   -0.5192   -1.5552 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1684    0.2187    0.7823 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7768    1.4920    0.5168 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8158    0.3206   -2.3980 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4160    1.8711   -1.8234 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5225   -1.3399    0.0061 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9907   -0.8214    1.6206 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1307    0.0413    1.2317 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7683    1.4249    2.3629 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2284    1.7531   -1.1390 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0279    0.1039   -1.3232 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.9205    4.0756   -0.5916 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.4741    2.4987    0.1168 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.8804    3.8188    1.2017 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9108   -2.8622   -1.7397 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7832   -3.7024   -2.2333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9899   -5.0073   -0.7120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1731   -4.9348   -0.4170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3299   -3.9701    1.2699 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3804   -3.6594    2.6417 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 20 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 24 26  2  0
 11 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  1  0
 30 31  1  0
 30 10  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  2 35  1  0
  2 36  1  0
  3 37  1  0
  3 38  1  0
  4 39  1  0
  4 40  1  0
  5 41  1  0
  5 42  1  0
  6 43  1  6
  7 44  1  0
  8 45  1  0
  9 46  1  0
 10 47  1  1
 11 48  1  1
 12 49  1  0
 12 50  1  0
 13 51  1  0
 14 52  1  0
 15 53  1  0
 15 54  1  0
 19 55  1  0
 19 56  1  0
 20 57  1  1
 21 58  1  0
 22 59  1  0
 22 60  1  0
 25 61  1  0
 25 62  1  0
 25 63  1  0
 27 64  1  6
 28 65  1  0
 29 66  1  0
 29 67  1  0
 30 68  1  1
 31 69  1  0
M  END

HEADER    PROTEIN                                 19-SEP-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-SEP-21         0                                  
HETATM    1  O   UNK     0       1.229 -12.697   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0      -0.105 -13.467   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0      -1.439 -12.697   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0      -0.105 -15.007   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.562 -13.467   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.896 -12.697   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.230 -13.467   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       6.563 -12.697   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       7.897 -13.467   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       7.897 -15.007   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       9.231 -12.697   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      10.564 -13.467   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      11.898 -12.697   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      11.898 -11.157   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      13.232 -10.387   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      13.393  -8.855   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      12.248  -7.825   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      14.899  -8.535   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      15.669  -9.869   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      17.201 -10.030   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      14.639 -11.013   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      14.959 -12.520   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      13.814 -13.550   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      14.134 -15.057   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      12.990 -16.087   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0      15.599 -15.532   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      15.919 -17.039   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      17.384 -17.515   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      17.704 -19.021   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      19.169 -19.497   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       3.896 -11.157   0.000  0.00  0.00           O+0
CONECT    1    2    5                                                       
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2                                                            
CONECT    5    1    6                                                       
CONECT    6    5    7   31                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   21                                                  
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   15   22                                                  
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29                                                            
CONECT   31    6                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   62    0
END

COMPND    HMDB0296945
HETATM    1  C1  UNL     1      -7.438   3.725  -0.834  1.00  0.00           C  
HETATM    2  C2  UNL     1      -7.592   2.249  -0.495  1.00  0.00           C  
HETATM    3  C3  UNL     1      -6.190   1.646  -0.431  1.00  0.00           C  
HETATM    4  C4  UNL     1      -6.352   0.191  -0.096  1.00  0.00           C  
HETATM    5  C5  UNL     1      -5.045  -0.549   0.003  1.00  0.00           C  
HETATM    6  C6  UNL     1      -4.203   0.076   1.082  1.00  0.00           C  
HETATM    7  O1  UNL     1      -4.905  -0.020   2.274  1.00  0.00           O  
HETATM    8  C7  UNL     1      -2.906  -0.608   1.268  1.00  0.00           C  
HETATM    9  C8  UNL     1      -2.431  -1.561   0.499  1.00  0.00           C  
HETATM   10  C9  UNL     1      -1.117  -2.235   0.709  1.00  0.00           C  
HETATM   11  C10 UNL     1      -0.270  -2.208  -0.539  1.00  0.00           C  
HETATM   12  C11 UNL     1      -0.215  -0.834  -1.170  1.00  0.00           C  
HETATM   13  C12 UNL     1       0.359   0.092  -0.194  1.00  0.00           C  
HETATM   14  C13 UNL     1       1.444   0.820  -0.310  1.00  0.00           C  
HETATM   15  C14 UNL     1       2.265   0.781  -1.530  1.00  0.00           C  
HETATM   16  C15 UNL     1       3.653   0.315  -1.225  1.00  0.00           C  
HETATM   17  O2  UNL     1       4.457   0.234  -2.162  1.00  0.00           O  
HETATM   18  O3  UNL     1       3.974   0.004   0.044  1.00  0.00           O  
HETATM   19  C16 UNL     1       5.156  -0.416   0.565  1.00  0.00           C  
HETATM   20  C17 UNL     1       6.269   0.561   0.644  1.00  0.00           C  
HETATM   21  O4  UNL     1       5.951   1.667   1.424  1.00  0.00           O  
HETATM   22  C18 UNL     1       6.898   0.962  -0.637  1.00  0.00           C  
HETATM   23  O5  UNL     1       8.142   1.577  -0.494  1.00  0.00           O  
HETATM   24  C19 UNL     1       8.381   2.762   0.111  1.00  0.00           C  
HETATM   25  C20 UNL     1       9.766   3.345   0.227  1.00  0.00           C  
HETATM   26  O6  UNL     1       7.473   3.462   0.616  1.00  0.00           O  
HETATM   27  C21 UNL     1      -0.931  -3.226  -1.408  1.00  0.00           C  
HETATM   28  O7  UNL     1      -0.148  -3.603  -2.496  1.00  0.00           O  
HETATM   29  C22 UNL     1      -1.137  -4.374  -0.434  1.00  0.00           C  
HETATM   30  C23 UNL     1      -1.311  -3.723   0.922  1.00  0.00           C  
HETATM   31  O8  UNL     1      -0.358  -4.221   1.830  1.00  0.00           O  
HETATM   32  H1  UNL     1      -8.354   4.274  -0.619  1.00  0.00           H  
HETATM   33  H2  UNL     1      -6.568   4.089  -0.218  1.00  0.00           H  
HETATM   34  H3  UNL     1      -7.100   3.821  -1.902  1.00  0.00           H  
HETATM   35  H4  UNL     1      -8.140   1.792  -1.342  1.00  0.00           H  
HETATM   36  H5  UNL     1      -8.125   2.183   0.454  1.00  0.00           H  
HETATM   37  H6  UNL     1      -5.627   2.225   0.300  1.00  0.00           H  
HETATM   38  H7  UNL     1      -5.767   1.741  -1.450  1.00  0.00           H  
HETATM   39  H8  UNL     1      -6.909  -0.271  -0.959  1.00  0.00           H  
HETATM   40  H9  UNL     1      -6.985   0.019   0.788  1.00  0.00           H  
HETATM   41  H10 UNL     1      -4.551  -0.502  -0.999  1.00  0.00           H  
HETATM   42  H11 UNL     1      -5.278  -1.609   0.199  1.00  0.00           H  
HETATM   43  H12 UNL     1      -3.983   1.120   0.782  1.00  0.00           H  
HETATM   44  H13 UNL     1      -5.106   0.886   2.656  1.00  0.00           H  
HETATM   45  H14 UNL     1      -2.301  -0.291   2.111  1.00  0.00           H  
HETATM   46  H15 UNL     1      -3.035  -1.879  -0.343  1.00  0.00           H  
HETATM   47  H16 UNL     1      -0.563  -1.828   1.557  1.00  0.00           H  
HETATM   48  H17 UNL     1       0.741  -2.525  -0.290  1.00  0.00           H  
HETATM   49  H18 UNL     1       0.433  -0.935  -2.049  1.00  0.00           H  
HETATM   50  H19 UNL     1      -1.207  -0.519  -1.555  1.00  0.00           H  
HETATM   51  H20 UNL     1      -0.168   0.219   0.782  1.00  0.00           H  
HETATM   52  H21 UNL     1       1.777   1.492   0.517  1.00  0.00           H  
HETATM   53  H22 UNL     1       1.816   0.321  -2.398  1.00  0.00           H  
HETATM   54  H23 UNL     1       2.416   1.871  -1.823  1.00  0.00           H  
HETATM   55  H24 UNL     1       5.523  -1.340   0.006  1.00  0.00           H  
HETATM   56  H25 UNL     1       4.991  -0.821   1.621  1.00  0.00           H  
HETATM   57  H26 UNL     1       7.131   0.041   1.232  1.00  0.00           H  
HETATM   58  H27 UNL     1       5.768   1.425   2.363  1.00  0.00           H  
HETATM   59  H28 UNL     1       6.228   1.753  -1.139  1.00  0.00           H  
HETATM   60  H29 UNL     1       7.028   0.104  -1.323  1.00  0.00           H  
HETATM   61  H30 UNL     1       9.921   4.076  -0.592  1.00  0.00           H  
HETATM   62  H31 UNL     1      10.474   2.499   0.117  1.00  0.00           H  
HETATM   63  H32 UNL     1       9.880   3.819   1.202  1.00  0.00           H  
HETATM   64  H33 UNL     1      -1.911  -2.862  -1.740  1.00  0.00           H  
HETATM   65  H34 UNL     1       0.783  -3.702  -2.233  1.00  0.00           H  
HETATM   66  H35 UNL     1      -1.990  -5.007  -0.712  1.00  0.00           H  
HETATM   67  H36 UNL     1      -0.173  -4.935  -0.417  1.00  0.00           H  
HETATM   68  H37 UNL     1      -2.330  -3.970   1.270  1.00  0.00           H  
HETATM   69  H38 UNL     1      -0.380  -3.659   2.642  1.00  0.00           H  
CONECT    1    2   32   33   34
CONECT    2    3   35   36
CONECT    3    4   37   38
CONECT    4    5   39   40
CONECT    5    6   41   42
CONECT    6    7    8   43
CONECT    7   44
CONECT    8    9    9   45
CONECT    9   10   46
CONECT   10   11   30   47
CONECT   11   12   27   48
CONECT   12   13   49   50
CONECT   13   14   14   51
CONECT   14   15   52
CONECT   15   16   53   54
CONECT   16   17   17   18
CONECT   18   19
CONECT   19   20   55   56
CONECT   20   21   22   57
CONECT   21   58
CONECT   22   23   59   60
CONECT   23   24
CONECT   24   25   26   26
CONECT   25   61   62   63
CONECT   27   28   29   64
CONECT   28   65
CONECT   29   30   66   67
CONECT   30   31   68
CONECT   31   69
END

HMDB0296945
     RDKit          3D
DG(2:0/0:0/5-iso PGF2VI)
 69 69  0  0  0  0  0  0  0  0999 V2000
   -7.4375    3.7252   -0.8341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5919    2.2487   -0.4950 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1898    1.6462   -0.4313 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3523    0.1908   -0.0964 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0454   -0.5487    0.0025 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2033    0.0756    1.0820 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.9052   -0.0196    2.2739 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9059   -0.6075    1.2679 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4309   -1.5613    0.4992 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1171   -2.2346    0.7094 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2696   -2.2078   -0.5393 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2146   -0.8344   -1.1700 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3592    0.0922   -0.1938 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4443    0.8196   -0.3103 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2653    0.7813   -1.5299 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6531    0.3152   -1.2255 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4571    0.2336   -2.1618 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9745    0.0041    0.0445 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1562   -0.4164    0.5650 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2689    0.5612    0.6437 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.9509    1.6670    1.4239 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8981    0.9618   -0.6372 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1417    1.5768   -0.4937 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3807    2.7622    0.1105 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7658    3.3447    0.2274 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4732    3.4618    0.6161 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9307   -3.2264   -1.4076 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1480   -3.6028   -2.4961 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1372   -4.3743   -0.4341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3106   -3.7233    0.9223 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3576   -4.2215    1.8302 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3544    4.2737   -0.6194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5677    4.0891   -0.2184 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0999    3.8206   -1.9021 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1402    1.7922   -1.3424 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1250    2.1828    0.4544 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6267    2.2247    0.2998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7671    1.7414   -1.4498 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9087   -0.2715   -0.9589 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9845    0.0194    0.7876 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5507   -0.5025   -0.9994 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2783   -1.6092    0.1986 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9826    1.1197    0.7819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1064    0.8857    2.6560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3006   -0.2907    2.1105 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0346   -1.8785   -0.3426 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5634   -1.8282    1.5573 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7406   -2.5253   -0.2905 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4330   -0.9348   -2.0489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2068   -0.5192   -1.5552 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1684    0.2187    0.7823 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7768    1.4920    0.5168 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8158    0.3206   -2.3980 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4160    1.8711   -1.8234 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5225   -1.3399    0.0061 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9907   -0.8214    1.6206 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1307    0.0413    1.2317 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7683    1.4249    2.3629 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2284    1.7531   -1.1390 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0279    0.1039   -1.3232 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.9205    4.0756   -0.5916 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.4741    2.4987    0.1168 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.8804    3.8188    1.2017 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9108   -2.8622   -1.7397 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7832   -3.7024   -2.2333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9899   -5.0073   -0.7120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1731   -4.9348   -0.4170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3299   -3.9701    1.2699 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3804   -3.6594    2.6417 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 20 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 24 26  2  0
 11 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  1  0
 30 31  1  0
 30 10  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  2 35  1  0
  2 36  1  0
  3 37  1  0
  3 38  1  0
  4 39  1  0
  4 40  1  0
  5 41  1  0
  5 42  1  0
  6 43  1  6
  7 44  1  0
  8 45  1  0
  9 46  1  0
 10 47  1  1
 11 48  1  1
 12 49  1  0
 12 50  1  0
 13 51  1  0
 14 52  1  0
 15 53  1  0
 15 54  1  0
 19 55  1  0
 19 56  1  0
 20 57  1  1
 21 58  1  0
 22 59  1  0
 22 60  1  0
 25 61  1  0
 25 62  1  0
 25 63  1  0
 27 64  1  6
 28 65  1  0
 29 66  1  0
 29 67  1  0
 30 68  1  1
 31 69  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
(2R)-3-(Acetyloxy)-2-hydroxypropyl (3Z)-5-[(1S,2R,3R,5S)-3,5-dihydroxy-2-[(1E,3R)-3-hydroxyoct-1-en-1-yl]cyclopentyl]pent-3-enoic acid	HMDB

Chemical Formula

C₂₃H₃₈O₈

Average Molecular Weight

442.549

Monoisotopic Molecular Weight

442.256668184

IUPAC Name

(2R)-3-(acetyloxy)-2-hydroxypropyl (3Z)-5-[(1S,2R,3R,5S)-3,5-dihydroxy-2-[(1E,3R)-3-hydroxyoct-1-en-1-yl]cyclopentyl]pent-3-enoate

Traditional Name

(2R)-3-(acetyloxy)-2-hydroxypropyl (3Z)-5-[(1S,2R,3R,5S)-3,5-dihydroxy-2-[(1E,3R)-3-hydroxyoct-1-en-1-yl]cyclopentyl]pent-3-enoate

CAS Registry Number

Not Available

SMILES

CCCCC[C@@H](O)\C=C\[C@H]1[C@H](O)C[C@H](O)[C@H]1C\C=C/CC(=O)OC[C@H](O)COC(C)=O

InChI Identifier

InChI=1S/C23H38O8/c1-3-4-5-8-17(25)11-12-20-19(21(27)13-22(20)28)9-6-7-10-23(29)31-15-18(26)14-30-16(2)24/h6-7,11-12,17-22,25-28H,3-5,8-10,13-15H2,1-2H3/b7-6-,12-11+/t17-,18-,19+,20-,21+,22-/m1/s1

InChI Key

QQDTZFRPFBHOJL-FPOGUXASSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Eicosanoids

Direct Parent

Prostaglandins and related compounds

Alternative Parents

Substituents

Prostaglandin skeleton
Diradylglycerol
Diacylglycerol
1,3-acyl-sn-glycerol
Fatty alcohol
Glycerolipid
Fatty acid ester
Dicarboxylic acid or derivatives
Cyclopentanol
Cyclic alcohol
Secondary alcohol
Carboxylic acid ester
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic homomonocyclic compound

Molecular Framework

Aliphatic homomonocyclic compounds

External Descriptors

Not Available

Ontology

Not Available

Endogenous (HMDB: HMDB0296945)

Process

Not Available

Role

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	1.93	ALOGPS
logP	0.99	ChemAxon
logS	-3.3	ALOGPS
pKa (Strongest Acidic)	13.58	ChemAxon
pKa (Strongest Basic)	-1.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	133.52 Å²	ChemAxon
Rotatable Bond Count	16	ChemAxon
Refractivity	117.44 m³·mol⁻¹	ChemAxon
Polarizability	49.84 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
AllCCS	[M+H]+	211.901	32859911
AllCCS	[M+H-H2O]+	209.939	32859911
AllCCS	[M+Na]+	214.21	32859911
AllCCS	[M+NH4]+	213.698	32859911
AllCCS	[M-H]-	207.201	32859911
AllCCS	[M+Na-2H]-	209.264	32859911
AllCCS	[M+HCOO]-	211.688	32859911
DeepCCS	[M+H]+	204.109	30932474
DeepCCS	[M-H]-	202.121	30932474
DeepCCS	[M-2H]-	235.36	30932474
DeepCCS	[M+Na]+	210.012	30932474

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.	6.15 minutes	32390414
Predicted by Siyang on May 30, 2022	12.5816 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	1.84 minutes	32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	2531.4 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	183.6 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	155.5 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	170.3 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	125.2 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	479.0 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	452.2 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	194.4 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	1050.7 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	489.4 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	1474.0 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	334.8 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	363.0 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	335.2 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	162.6 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	45.4 seconds	40023050

Predicted Kovats Retention Indices

Not Available

Spectra

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - DG(2:0/0:0/5-iso PGF2VI) 10V, Positive-QTOF	splash10-0aor-0008900000-ca9d3e437fae51cc87fc	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - DG(2:0/0:0/5-iso PGF2VI) 20V, Positive-QTOF	splash10-014i-3239300000-6cffb982221ded13d7ea	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - DG(2:0/0:0/5-iso PGF2VI) 40V, Positive-QTOF	splash10-014l-9600000000-c88c6c167338e59ab81a	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - DG(2:0/0:0/5-iso PGF2VI) 10V, Negative-QTOF	splash10-053r-5019000000-81592ab8809252f71d81	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - DG(2:0/0:0/5-iso PGF2VI) 20V, Negative-QTOF	splash10-0a4i-9003000000-0226844c2f7f54edee54	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - DG(2:0/0:0/5-iso PGF2VI) 40V, Negative-QTOF	splash10-0abc-9084000000-1c6d8c942abd525f722f	2021-10-21	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

157005052

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Only showing the first 10 proteins. There are 132 proteins in total.

Show all enzymes and transporters

Enzymes

Enzyme Details

1. Diacylglycerol kinase theta

General function:: Involved in diacylglycerol kinase activity
Specific function:: Phosphorylates diacylglycerol (DAG) to generate phosphatidic acid (PA). May regulate the activity of protein kinase C by controlling the balance between these two signaling lipids. Activated in the nucleus in response to alpha-thrombin and nerve growth factor. May be involved in cAMP- induced activation of NR5A1 and subsequent steroidogenic gene transcription by delivering PA as ligand for NR5A1. Acts synergistically with NR5A1 on CYP17 transcriptional activity
Gene Name:: DGKQ
Uniprot ID:: P52824
Molecular weight:: 101154.0

Enzyme Details

2. Pancreatic triacylglycerol lipase

General function:: Involved in catalytic activity
Specific function:: Not Available
Gene Name:: PNLIP
Uniprot ID:: P16233
Molecular weight:: 51156.48

Enzyme Details

3. 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1

General function:: Involved in calcium ion binding
Specific function:: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
Gene Name:: PLCB1
Uniprot ID:: Q9NQ66
Molecular weight:: 138565.805

Enzyme Details

4. 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4

General function:: Involved in calcium ion binding
Specific function:: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. This form has a role in retina signal transduction.
Gene Name:: PLCB4
Uniprot ID:: Q15147
Molecular weight:: 136105.065

Enzyme Details

5. 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

General function:: Involved in calcium ion binding
Specific function:: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
Gene Name:: PLCB2
Uniprot ID:: Q00722
Molecular weight:: 134023.21

Enzyme Details

6. Diacylglycerol kinase gamma

General function:: Involved in diacylglycerol kinase activity
Specific function:: Reverses the normal flow of glycerolipid biosynthesis by phosphorylating diacylglycerol back to phosphatidic acid
Gene Name:: DGKG
Uniprot ID:: P49619
Molecular weight:: 89095.3

Enzyme Details

7. Hepatic triacylglycerol lipase

General function:: Involved in catalytic activity
Specific function:: Hepatic lipase has the capacity to catalyze hydrolysis of phospholipids, mono-, di-, and triglycerides, and acyl-CoA thioesters. It is an important enzyme in HDL metabolism. Hepatic lipase binds heparin.
Gene Name:: LIPC
Uniprot ID:: P11150
Molecular weight:: 55914.1

Enzyme Details

8. Lysosomal acid lipase/cholesteryl ester hydrolase

General function:: Involved in lipid metabolic process
Specific function:: Crucial for the intracellular hydrolysis of cholesteryl esters and triglycerides that have been internalized via receptor-mediated endocytosis of lipoprotein particles. Important in mediating the effect of LDL (low density lipoprotein) uptake on suppression of hydroxymethylglutaryl-CoA reductase and activation of endogenous cellular cholesteryl ester formation.
Gene Name:: LIPA
Uniprot ID:: P38571
Molecular weight:: 45418.71

Enzyme Details

9. 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3

General function:: Involved in calcium ion binding
Specific function:: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
Gene Name:: PLCB3
Uniprot ID:: Q01970
Molecular weight:: 138797.725

Enzyme Details

10. Inactive pancreatic lipase-related protein 1

General function:: Involved in catalytic activity
Specific function:: May function as inhibitor of dietary triglyceride digestion. Lacks detectable lipase activity towards triglycerides, diglycerides, phosphatidylcholine, galactolipids or cholesterol esters (in vitro) (By similarity).
Gene Name:: PNLIPRP1
Uniprot ID:: P54315
Molecular weight:: Not Available

Transporters

Enzyme Details

1. Long-chain fatty acid transport protein 1

General function:: Lipid transport and metabolism
Specific function:: Involved in translocation of long-chain fatty acids (LFCA) across the plasma membrane. The LFCA import appears to be hormone-regulated in a tissue-specific manner. In adipocytes, but not myocytes, insulin induces a rapid translocation of FATP1 from intracellular compartments to the plasma membrane, paralleled by increased LFCA uptake. May act directly as a bona fide transporter, or alternatively, in a cytoplasmic or membrane- associated multimeric protein complex to trap and draw fatty acids towards accumulation. Plays a pivotal role in regulating available LFCA substrates from exogenous sources in tissues undergoing high levels of beta-oxidation or triglyceride synthesis. May be involved in regulation of cholesterol metabolism. Has acyl-CoA ligase activity for long-chain and very-long-chain fatty acids
Gene Name:: SLC27A1
Uniprot ID:: Q6PCB7
Molecular weight:: 71107.5

Only showing the first 10 proteins. There are 132 proteins in total.

Show all enzymes and transporters

Showing metabocard for DG(2:0/0:0/5-iso PGF2VI) (HMDB0296945)

MOL for HMDB0296945 (DG(2:0/0:0/5-iso PGF2VI))

3D MOL for HMDB0296945 (DG(2:0/0:0/5-iso PGF2VI))

3D SDF for HMDB0296945 (DG(2:0/0:0/5-iso PGF2VI))

3D-SDF for HMDB0296945 (DG(2:0/0:0/5-iso PGF2VI))

PDB for HMDB0296945 (DG(2:0/0:0/5-iso PGF2VI))

3D PDB for HMDB0296945 (DG(2:0/0:0/5-iso PGF2VI))

SMILES for HMDB0296945 (DG(2:0/0:0/5-iso PGF2VI))

INCHI for HMDB0296945 (DG(2:0/0:0/5-iso PGF2VI))

Structure for HMDB0296945 (DG(2:0/0:0/5-iso PGF2VI))

3D Structure for HMDB0296945 (DG(2:0/0:0/5-iso PGF2VI))

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

MS/MS Spectra

Enzymes

Transporters