| Record Information |
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| Version | 5.0 |
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| Status | Predicted |
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| Creation Date | 2021-09-19 08:19:20 UTC |
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| Update Date | 2022-11-30 20:10:19 UTC |
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| HMDB ID | HMDB0297364 |
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| Secondary Accession Numbers | None |
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| Metabolite Identification |
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| Common Name | DG(20:4(6E,8Z,11Z,14Z)+=O(5)/a-13:0/0:0) |
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| Description | DG(20:4(6E,8Z,11Z,14Z)+=O(5)/a-13:0/0:0) belongs to the family of Diacylglycerols. These are glycerolipids lipids containing a common glycerol backbone to which at least one fatty acyl group is esterified. DG(20:4(6E,8Z,11Z,14Z)+=O(5)/a-13:0/0:0) is also a substrate of diacylglycerol kinase. It is involved in the phospholipid metabolic pathway. |
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| Structure | CCCCC\C=C/C\C=C/C\C=C/C=C/C(=O)CCCC(=O)OC[C@H](CO)OC(=O)CCCCCCCCC(C)CC InChI=1S/C36H60O6/c1-4-6-7-8-9-10-11-12-13-14-15-19-22-26-33(38)27-24-29-35(39)41-31-34(30-37)42-36(40)28-23-20-17-16-18-21-25-32(3)5-2/h9-10,12-13,15,19,22,26,32,34,37H,4-8,11,14,16-18,20-21,23-25,27-31H2,1-3H3/b10-9-,13-12-,19-15-,26-22+/t32?,34-/m0/s1 |
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| Synonyms | | Value | Source |
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| (2S)-3-Hydroxy-2-[(10-methyldodecanoyl)oxy]propyl (8Z,11Z,14Z)-5-oxoicosa-6,8,11,14-tetraenoic acid | HMDB |
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| Chemical Formula | C36H60O6 |
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| Average Molecular Weight | 588.87 |
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| Monoisotopic Molecular Weight | 588.438989652 |
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| IUPAC Name | (2S)-3-hydroxy-2-[(10-methyldodecanoyl)oxy]propyl (6E,8Z,11Z,14Z)-5-oxoicosa-6,8,11,14-tetraenoate |
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| Traditional Name | (2S)-3-hydroxy-2-[(10-methyldodecanoyl)oxy]propyl (6E,8Z,11Z,14Z)-5-oxoicosa-6,8,11,14-tetraenoate |
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| CAS Registry Number | Not Available |
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| SMILES | CCCCC\C=C/C\C=C/C\C=C/C=C/C(=O)CCCC(=O)OC[C@H](CO)OC(=O)CCCCCCCCC(C)CC |
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| InChI Identifier | InChI=1S/C36H60O6/c1-4-6-7-8-9-10-11-12-13-14-15-19-22-26-33(38)27-24-29-35(39)41-31-34(30-37)42-36(40)28-23-20-17-16-18-21-25-32(3)5-2/h9-10,12-13,15,19,22,26,32,34,37H,4-8,11,14,16-18,20-21,23-25,27-31H2,1-3H3/b10-9-,13-12-,19-15-,26-22+/t32?,34-/m0/s1 |
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| InChI Key | HMNIOVBTPJEZHG-HPGVIIDBSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as 1,2-diacylglycerols. These are diacylglycerols containing a glycerol acylated at positions 1 and 2. |
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| Kingdom | Organic compounds |
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| Super Class | Lipids and lipid-like molecules |
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| Class | Glycerolipids |
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| Sub Class | Diradylglycerols |
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| Direct Parent | 1,2-diacylglycerols |
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| Alternative Parents | |
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| Substituents | - 1,2-acyl-sn-glycerol
- Fatty acid ester
- Fatty acyl
- Dicarboxylic acid or derivatives
- Alpha,beta-unsaturated ketone
- Enone
- Acryloyl-group
- Ketone
- Carboxylic acid ester
- Carboxylic acid derivative
- Organic oxygen compound
- Organic oxide
- Hydrocarbon derivative
- Primary alcohol
- Organooxygen compound
- Carbonyl group
- Alcohol
- Aliphatic acyclic compound
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| Molecular Framework | Aliphatic acyclic compounds |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Predicted by Siyang on May 30, 2022 | 35.2794 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 0.85 minutes | 32390414 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 4914.8 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 759.8 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 347.2 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 371.6 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 1043.9 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 1728.2 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 1116.9 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 114.7 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 3413.3 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 1097.9 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 2881.2 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 1175.3 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 752.6 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 404.8 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 768.7 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 10.3 seconds | 40023050 |
Predicted Kovats Retention IndicesDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| DG(20:4(6E,8Z,11Z,14Z)+=O(5)/a-13:0/0:0),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C=C\C(=CCCC(=O)OC[C@H](CO[Si](C)(C)C)OC(=O)CCCCCCCCC(C)CC)O[Si](C)(C)C | 4418.8 | Semi standard non polar | 33892256 | | DG(20:4(6E,8Z,11Z,14Z)+=O(5)/a-13:0/0:0),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C=C\C(=CCCC(=O)OC[C@H](CO[Si](C)(C)C)OC(=O)CCCCCCCCC(C)CC)O[Si](C)(C)C | 3974.7 | Standard non polar | 33892256 | | DG(20:4(6E,8Z,11Z,14Z)+=O(5)/a-13:0/0:0),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C=C\C(=CCCC(=O)OC[C@H](CO[Si](C)(C)C)OC(=O)CCCCCCCCC(C)CC)O[Si](C)(C)C | 4566.1 | Standard polar | 33892256 | | DG(20:4(6E,8Z,11Z,14Z)+=O(5)/a-13:0/0:0),2TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C=C\C(=CCCC(=O)OC[C@H](CO[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC(C)CC)O[Si](C)(C)C(C)(C)C | 4901.1 | Semi standard non polar | 33892256 | | DG(20:4(6E,8Z,11Z,14Z)+=O(5)/a-13:0/0:0),2TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C=C\C(=CCCC(=O)OC[C@H](CO[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC(C)CC)O[Si](C)(C)C(C)(C)C | 4273.1 | Standard non polar | 33892256 | | DG(20:4(6E,8Z,11Z,14Z)+=O(5)/a-13:0/0:0),2TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C=C\C(=CCCC(=O)OC[C@H](CO[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC(C)CC)O[Si](C)(C)C(C)(C)C | 4573.2 | Standard polar | 33892256 |
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